Network and network analysis (Beta value)
R 2.13.0, SageBionetworksCoex 0.11, running time ~4.5 hours
Total number of modules is 9
Module | # of loci |
|---|---|
black | 32 |
blue | 264 |
brown | 243 |
green | 39 |
pink | 32 |
red | 35 |
turquoise | 1422 |
yellow | 159 |
Analysis of the PC1 of each module:
Chromosomal density maps can be found
Only brown and green modules are represented by CpG mostly coming from a single chromosome (chromosome X and chromosome 1)
Gene Ontology analysis: