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CSBC / PSON Data File Schema

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This describes the 'Explore Data' table.

This is not a card, but an explore table.

File view driving this: https://www.synapse.org/#!Synapse:syn9630847/tables/

Note that there is no explicit aliasing between Column Name and Display Name. Rather, camelCase Column Names are automatically rendered as Camel Case. The table below just makes that clear.

Display Name

Column Name

Facet Y/N

UI Mapping

Destination

Searchable Y/N

Search hint text


datasetName

N

Card_Title

link to dataset detail pages, with information populated from datasets view (syn18488466) with row/entry having datasets column set to value in datasets column in this table.

Y

e.g. migration

Grant Name

grantName

N

Card_SubTitle


Y

e.g. immunology


id

N



N



datasets

N





Description

summary

N

Card_Description


Y

e.g. spatiotemporal

Publication

Title

N

Secondary_Label_1

PubMed

Y

e.g. immune escape


PubMed

N



N


Overall Design

overallDesign

N

Secondary_Label_2




Theme

Theme

N



N

e.g. tumor-immune

Tumor Type

tumorType

Y

Secondary_Label_3


Y

e.g. Skin Cutaneous Melanoma

Assay

assay

Y

Secondary_Label_4


Y

e.g. RNA-seq

Studies

studies

N


comma-separated list of synIds, should link to study detail pages,

with information populated from studies view (syn18483791) with row/entry having

studies column set to this value.

N

e.g. syn13857585

Species

species

Y

Secondary_Label_5


Y

e.g. Human

External Link

externalLink

N

Secondary_Label_6

URL embedded in HTML

N

e.g. GSE93776

Consortium

consortium

Y

Secondary_Label_7


Y

e.g. PS-ON

Grant Type

grantType

Y

Secondary_Label_8


Y

e.g. U01

Detail pages

  • No labels