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The command line client is installed with the Synapse Python client, therefore Python 3 is required to install the Synapse command line client. Login to Synapse. If working on your personal computer, you may store your credentials locally by including the --rememberMe
argument to allow automatic authentication with future Synapse interactions. This is recommended to prevent a case where you might accidentally share your password while sharing analytical code.
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You may choose to download the file as a .csv
or .tsv
. Files are named Job-####
, where # includes a long set of numbers. Move this file to your working directory to proceed with the following steps.
Install the Synapse Python client synapseclient
to download data from Synapse, the pandas
library to read a csv file and the os
module to make a directory. Login to Synapse using your password or preferably an access token.
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