Versions Compared

Old Version 4

changes.mady.by.user Mette Peters (Unlicensed)

Saved on

compared with

New Version 5

changes.mady.by.user Mette Peters (Unlicensed)

Saved on

Key

  • This line was added.
  • This line was removed.
  • Formatting was changed.


Genotypes

These are the variables describing the mice in the Individual Metadata file. The modelSystemName is used as file annotation. The AD Model Explorer uses the LOAD definition.

Variable

Definition

Example

officialName

Full name indicating all transgenes, taken from the strain’s Jax datasheet

Abca7*A1527G/APOE4/Trem2*R47H

modelSystemName

Strain annotation - see AMP-AD Metadata Dictionary. Used as file annotation

Abca7A1527GAPOE4Trem2R47H

individualCommonGenotype

Strain name that includes LOAD1 or LOAD2 terminology. This is the model name used in the AD Model Explorer

LOAD1= APOE4_HOMOZYGOUS; TREM2R47H_HOMOZYGOUS. LOAD2=APOE4_HOMOZYGOUS; TREM2R47H_HOMOZYGOUS; HTAUABETA_HOMOZYGOUS

LOAD1

LOAD1.ABCA7KIABCA7A1527G

stockNumber

The Jax stock number

030283

genotypeBackground

Background genotype

C57BL6J

genotype

Genotype of animal that indicates littermate carriers vs noncarriers

Abca7_KI_homozygous or Abca7_KI_noncarrierAPOE4_homozygous; TREM2R47H_homozygous; ABCA7KI_NONCARRIER

APOE4_homozygous; TREM2R47H_homozygous; ABCA7KI_HOMOZYGOUS

modelCommonName