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If you have questions about any of these steps, or to request access to the MODEL-AD Data Upload team, please contact Sage’s AMP-AD Administration team.
Uploading
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Study Description
Each study should be accompanied by a brief study description that includes the species, genetic background, a link to the Jax Datasheet (if available) or a description of how the animals were created.
Assay Description
Each assay should be accompanied by a short description that includes specimen processing, data generation, and data processing, as applicable -- something akin to the Materials and Methods section of a manuscript.
These descriptions can be submitted via the Data Validator by selecting the ‘Documentation’ tab on the left side of the window. At present, you can’t see files after you’ve uploaded them. The data curation team will always look at file versions and date/time stamps and tak
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Model Documentation
Mouse Model Description
This article will teach you how to submit new rodent models to the Data Coordination Center (DCC) at Sage Bionetworks. To start, MODEL-AD teams must inform the DCC about new models by submitting a complete and accurate description via the MODEL-AD Tools survey. The content entered into the survey will be used to populate the corresponding Experimental Tool card in the AD Knowledge Portal. Each mouse model should be accompanied by a brief study description that includes the species, genetic background, a link to the Jax Datasheet (if available) or a description of how the animals were created.
Metadata Key Variables
Mouse models must include the information listed below. The model information should match that on the Jackson labs stock pages, and any discrepancies will need to be resolved. If you have any questions, please contact the DCC before submitting.
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