R version 2.13.0 64 bit, SageBionetworksCoex 0.11, running time ~4.5 hours (~27k by 486)
beta=6, R=0.89. Number of modules: 18 + 1 (grey):
Module |
# of probes |
Module |
# of probes |
---|---|---|---|
black |
108 |
pink |
97 |
blue |
1206 |
purple |
89 |
brown |
615 |
red |
113 |
cyan |
43 |
salmon |
46 |
greenyellow |
86 |
tan |
85 |
grey |
22115 |
turquoise |
2151 |
grey60 |
33 |
yellow |
469 |
lightcyan |
34 |
lightgreen |
32 |
magenta |
92 |
green |
121 |
midnightblue |
43 |
|
|
Analysis of the first PC of each module: