Installation:
- If needed, install R from http://cran.r-project.org/
- From the R command prompt, install the following packages:
At a later date, we anticipate that this package will be available via Bioconductor or CRAN
source('http://sage.fhcrc.org/CRAN.R') pkgInstall(c("synapseClient"))
- NOTE: If you are running OSX, you will need to install tcl/tk for all of the client features to work properly. You can find the installer here: http://cran.r-project.org/bin/macosx/tools/tcltk-8.5.5-x11.dmg
- If anything goes wrong see Troubleshooting Installation Problems
Optional:
- We recommend installing RStudio It is an integrated development environment for writing and running R code.
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Supported Platforms:
- Windows 32bit
- Windows 64bit
- Mac OSX Snow Leopard 10.6
- Mac OSX Lion Lion 10.7
- Any Linux/Unix platform will use the source of the package and compile/install as-needed