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changes.mady.by.user Nicole Deflaux

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...

Code Block
HTTP/1.1 200 OK
Content-Type: application/json
Transfer-Encoding: chunked
Server: Jetty(6.1.x)

{
  "results": [
    {
      "Disease": ["Cancer"],
      "Institution": ["Asian Cancer Research Group, Inc., (ACRG)"],
      "Internal Name": ["ACRG_gastric"],
      "Number of Samples": [2000],
      "Posting Restriction": ["unspecified"],
      "Species": ["Human"],
      "Tissue/Tumor": ["Stomach"],
      "Type": ["GCD"],
      "abstract_file_path": ["/srv/www/htdocs/Foswiki/downloads/data/v2/abstract_files/gastric_cancer_acrg.txt"],
      "citation_file_path": ["/srv/www/htdocs/Foswiki/downloads/data/v2/citation_files/gastric_cancer_acrg.txt"],
      "creationDate": 12989453770851299001204485,
      "creator": "Asian Cancer Research Group, Inc., (ACRG)",
      "db_id": [1],
      "description": null,
      "hasClinicalData": false,
      "hasExpressionData": false,
      "hasGeneticData": false,
      "id": "agxkZWZsYXV4LXRlc3RyEwsSDUdBRUpET0RhdGFzZXQYAQwag1kZWZsYXV4LXRlc3QychMLEg1HQUVKRE9EYXRhc2V0GAEM",
      "name": "Gastric Cancer ACRG",
      "readme_file_path": ["/srv/www/htdocs/Foswiki/downloads/data/v2/readme_files/gastric_cancer_acrg.txt"],
      "releaseDate": null,
      "status": "Future",
      "user_agreement_file_path": ["/srv/www/htdocs/Foswiki/downloads/data/v2/user_agreement_files/gastric_cancer_acrg.txt"],
      "version": "0.0.1"
    },
    {
      "Disease": ["Cancer"],
      "Institution": ["Asian Cancer Research Group, Inc., (ACRG)"],
      "Internal Name": ["ACRG_lung"],
      "Number of Samples": [2000],
      "Posting Restriction": ["unspecified"],
      "Species": ["Human"],
      "Tissue/Tumor": ["Lung"],
      "Type": ["GCD"],
      "abstract_file_path": ["/srv/www/htdocs/Foswiki/downloads/data/v2/abstract_files/lung_cancer_acrg.txt"],
      "citation_file_path": ["/srv/www/htdocs/Foswiki/downloads/data/v2/citation_files/lung_cancer_acrg.txt"],
      "creationDate": 12989453791401299001205509,
      "creator": "Asian Cancer Research Group, Inc., (ACRG)",
      "db_id": [2],
      "description": null,
      "hasClinicalData": false,
      "hasExpressionData": false,
      "hasGeneticData": false,
      "id": "agxkZWZsYXV4LXRlc3RyEwsSDUdBRUpET0RhdGFzZXQYGAwag1kZWZsYXV4LXRlc3QychMLEg1HQUVKRE9EYXRhc2V0GBgM",
      "name": "Lung Cancer ACRG",
      "readme_file_path": ["/srv/www/htdocs/Foswiki/downloads/data/v2/readme_files/lung_cancer_acrg.txt"],
      "releaseDate": null,
      "status": "Future",
      "user_agreement_file_path": ["/srv/www/htdocs/Foswiki/downloads/data/v2/user_agreement_files/lung_cancer_acrg.txt"],
      "version": "0.0.1"
    },
    {
      "Disease": ["Cancer"],
      "Institution": ["Fred Hutchinson Cancer Research Center /SKCCC at Johns Hopkins"],
      "Internal Name": ["AML-Ped_TARGET"],
      "Number of Samples": [200],
      "Posting Restriction": ["Link to data source"],
      "Species": ["Human"],
      "Tissue/Tumor": ["Blood"],
      "Type": ["GCD"],
      "abstract_file_path": ["/srv/www/htdocs/Foswiki/downloads/data/v2/abstract_files/pediatric_aml_target.txt"],
      "citation_file_path": ["/srv/www/htdocs/Foswiki/downloads/data/v2/citation_files/pediatric_aml_target.txt"],
      "creationDate": 12989453797121299001205984,
      "creator": "Soheil Meshinchi/ Bob Arceci",
      "db_id": [3],
      "description": null,
      "hasClinicalData": false,
      "hasExpressionData": false,
      "hasGeneticData": false,
      "id": "agxkZWZsYXV4LXRlc3RyEwsSDUdBRUpET0RhdGFzZXQYKwwag1kZWZsYXV4LXRlc3QychMLEg1HQUVKRE9EYXRhc2V0GCsM",
      "name": "Pediatric AML TARGET",
      "readme_file_path": ["/srv/www/htdocs/Foswiki/downloads/data/v2/readme_files/pediatric_aml_target.txt"],
      "releaseDate": null,
      "status": "Pending",
      "user_agreement_file_path": ["/srv/www/htdocs/Foswiki/downloads/data/v2/user_agreement_files/pediatric_aml_target.txt"],
      "version": "0.0.1"
    }
  ],
  "totalNumberOfResults": 114
}

...

Code Block
HTTP/1.1 200 OK
Content-Type: application/json
Transfer-Encoding: chunked
Server: Jetty(6.1.x)

{
  "results": [
    {
      "Disease": ["Cancer"],
      "Institution": ["Sage Bionetworks"],
      "Internal Name": ["Nonresponders_AML"],
      "Number of Samples": [300],
      "Posting Restriction": ["unspecified"],
      "Species": ["Human"],
      "Tissue/Tumor": ["Blood"],
      "Type": ["GCD"],
      "abstract_file_path": ["/srv/www/htdocs/Foswiki/downloads/data/v2/abstract_files/aml_nonresponders_cohort.txt"],
      "citation_file_path": ["/srv/www/htdocs/Foswiki/downloads/data/v2/citation_files/aml_nonresponders_cohort.txt"],
      "creationDate": 12989454043561299001230853,
      "creator": "Stephen Friend",
      "db_id": [74],
      "description": null,
      "hasClinicalData": false,
      "hasExpressionData": false,
      "hasGeneticData": false,
      "id": "agxkZWZsYXV4LXRlc3RyFAsSDUdBRUpET0RhdGFzZXQYoAsMag1kZWZsYXV4LXRlc3QychQLEg1HQUVKRE9EYXRhc2V0GKALDA",
      "name": "AML Nonresponders Cohort",
      "readme_file_path": ["/srv/www/htdocs/Foswiki/downloads/data/v2/readme_files/aml_nonresponders_cohort.txt"],
      "releaseDate": null,
      "status": "Future",
      "user_agreement_file_path": ["/srv/www/htdocs/Foswiki/downloads/data/v2/user_agreement_files/aml_nonresponders_cohort.txt"],
      "version": "0.0.1"
    },
    {
      "Disease": ["Cancer"],
      "Institution": ["TCGA"],
      "Internal Name": ["TCGA_AML"],
      "Number of Samples": [500],
      "Posting Restriction": ["Embargo"],
      "Species": ["Human"],
      "Tissue/Tumor": ["Blood"],
      "Type": ["GCD"],
      "abstract_file_path": ["/srv/www/htdocs/Foswiki/downloads/data/v2/abstract_files/aml_tcga.txt"],
      "citation_file_path": ["/srv/www/htdocs/Foswiki/downloads/data/v2/citation_files/aml_tcga.txt"],
      "creationDate": 12989454110551299001236973,
      "creator": "TCGA",
      "db_id": [96],
      "description": null,
      "hasClinicalData": false,
      "hasExpressionData": false,
      "hasGeneticData": false,
      "id": "agxkZWZsYXV4LXRlc3RyFAsSDUdBRUpET0RhdGFzZXQYzA4Mag1kZWZsYXV4LXRlc3QychQLEg1HQUVKRE9EYXRhc2V0GMwODA",
      "name": "AML TCGA",
      "readme_file_path": ["/srv/www/htdocs/Foswiki/downloads/data/v2/readme_files/aml_tcga.txt"],
      "releaseDate": null,
      "status": "Future",
      "user_agreement_file_path": ["/srv/www/htdocs/Foswiki/downloads/data/v2/user_agreement_files/aml_tcga.txt"],
      "version": "0.0.1"
    },
    {
      "Disease": ["Asthma"],
      "Institution": ["Imperial College London"],
      "Internal Name": ["Cookson_LCLs"],
      "Number of Samples": [404],
      "Posting Restriction": ["unspecified"],
      "Species": ["Human"],
      "Tissue/Tumor": ["Lymphoblastoid Cell Line"],
      "Type": ["Other"],
      "abstract_file_path": ["/srv/www/htdocs/Foswiki/downloads/data/v2/abstract_files/asthma_human_lymphoblastoid_cell_lines.txt"],
      "citation_file_path": ["/srv/www/htdocs/Foswiki/downloads/data/v2/citation_files/asthma_human_lymphoblastoid_cell_lines.txt"],
      "creationDate": 12989453890611299001215735,
      "creator": "Cookson",
      "db_id": [25],
      "description": null,
      "hasClinicalData": false,
      "hasExpressionData": false,
      "hasGeneticData": false,
      "id": "agxkZWZsYXV4LXRlc3RyFAsSDUdBRUpET0RhdGFzZXQY5QMMag1kZWZsYXV4LXRlc3QychQLEg1HQUVKRE9EYXRhc2V0GOUDDA",
      "name": "Asthma Human Lymphoblastoid Cell Lines",
      "readme_file_path": ["/srv/www/htdocs/Foswiki/downloads/data/v2/readme_files/asthma_human_lymphoblastoid_cell_lines.txt"],
      "releaseDate": null,
      "status": "Future",
      "user_agreement_file_path": ["/srv/www/htdocs/Foswiki/downloads/data/v2/user_agreement_files/asthma_human_lymphoblastoid_cell_lines.txt"],
      "version": "0.0.1"
    }
  ],
  "totalNumberOfResults": 114
}

...

Code Block
HTTP/1.1 200 OK
Content-Type: application/json
Transfer-Encoding: chunked
Server: Jetty(6.1.x)

{
  "results": [{
    "Disease": ["CVD"],
    "Institution": ["Vanderbilt University/ University of Pittsburg/ StJudes Hospital"],
    "Internal Name": ["Deliver"],
    "Number of Samples": [517],
    "Posting Restriction": ["Link to data source"],
    "Species": ["Human"],
    "Tissue/Tumor": ["Liver"],
    "Type": ["GCD"],
    "abstract_file_path": ["/srv/www/htdocs/Foswiki/downloads/data/v2/abstract_files/human_liver_cohort.txt"],
    "citation_file_path": ["/srv/www/htdocs/Foswiki/downloads/data/v2/citation_files/human_liver_cohort.txt"],
    "creationDate": 12989453904301299001217211,
    "creator": "Fred Guengrich/Steve Strom/ Erin Schuetz",
    "db_id": [29],
    "description": null,
    "hasClinicalData": true,
    "hasExpressionData": true,
    "hasGeneticData": true,
    "id": "agxkZWZsYXV4LXRlc3RyFAsSDUdBRUpET0RhdGFzZXQYtAQMag1kZWZsYXV4LXRlc3QychQLEg1HQUVKRE9EYXRhc2V0GLQEDA",
    "name": "Human Liver Cohort",
    "readme_file_path": ["/srv/www/htdocs/Foswiki/downloads/data/v2/readme_files/human_liver_cohort.txt"],
    "releaseDate": null,
    "status": "Current",
    "user_agreement_file_path": ["/srv/www/htdocs/Foswiki/downloads/data/v2/user_agreement_files/human_liver_cohort.txt"],
    "version": "0.0.1"
  }],
  "totalNumberOfResults": 114
}

...

Code Block
HTTP/1.1 200 OK
Content-Type: application/json
Transfer-Encoding: chunked
Server: Jetty(6.1.x)

{
  "results": [
    {
      "Disease": ["Cancer"],
      "Institution": ["Asian Cancer Research Group, Inc., (ACRG)"],
      "Internal Name": ["ACRG_gastric"],
      "Number of Samples": [2000],
      "Posting Restriction": ["unspecified"],
      "Species": ["Human"],
      "Tissue/Tumor": ["Stomach"],
      "Type": ["GCD"],
      "abstract_file_path": ["/srv/www/htdocs/Foswiki/downloads/data/v2/abstract_files/gastric_cancer_acrg.txt"],
      "citation_file_path": ["/srv/www/htdocs/Foswiki/downloads/data/v2/citation_files/gastric_cancer_acrg.txt"],
      "creationDate": 12989453770851299001204485,
      "creator": "Asian Cancer Research Group, Inc., (ACRG)",
      "db_id": [1],
      "description": null,
      "hasClinicalData": false,
      "hasExpressionData": false,
      "hasGeneticData": false,
      "id": "agxkZWZsYXV4LXRlc3RyEwsSDUdBRUpET0RhdGFzZXQYAQwag1kZWZsYXV4LXRlc3QychMLEg1HQUVKRE9EYXRhc2V0GAEM",
      "name": "Gastric Cancer ACRG",
      "readme_file_path": ["/srv/www/htdocs/Foswiki/downloads/data/v2/readme_files/gastric_cancer_acrg.txt"],
      "releaseDate": null,
      "status": "Future",
      "user_agreement_file_path": ["/srv/www/htdocs/Foswiki/downloads/data/v2/user_agreement_files/gastric_cancer_acrg.txt"],
      "version": "0.0.1"
    },
    {
      "Disease": ["Cancer"],
      "Institution": ["Asian Cancer Research Group, Inc., (ACRG)"],
      "Internal Name": ["ACRG_lung"],
      "Number of Samples": [2000],
      "Posting Restriction": ["unspecified"],
      "Species": ["Human"],
      "Tissue/Tumor": ["Lung"],
      "Type": ["GCD"],
      "abstract_file_path": ["/srv/www/htdocs/Foswiki/downloads/data/v2/abstract_files/lung_cancer_acrg.txt"],
      "citation_file_path": ["/srv/www/htdocs/Foswiki/downloads/data/v2/citation_files/lung_cancer_acrg.txt"],
      "creationDate": 12989453791401299001205509,
      "creator": "Asian Cancer Research Group, Inc., (ACRG)",
      "db_id": [2],
      "description": null,
      "hasClinicalData": false,
      "hasExpressionData": false,
      "hasGeneticData": false,
      "id": "agxkZWZsYXV4LXRlc3RyEwsSDUdBRUpET0RhdGFzZXQYGAwag1kZWZsYXV4LXRlc3QychMLEg1HQUVKRE9EYXRhc2V0GBgM",
      "name": "Lung Cancer ACRG",
      "readme_file_path": ["/srv/www/htdocs/Foswiki/downloads/data/v2/readme_files/lung_cancer_acrg.txt"],
      "releaseDate": null,
      "status": "Future",
      "user_agreement_file_path": ["/srv/www/htdocs/Foswiki/downloads/data/v2/user_agreement_files/lung_cancer_acrg.txt"],
      "version": "0.0.1"
    },
    {
      "Disease": ["Cancer"],
      "Institution": ["Fred Hutchinson Cancer Research Center /SKCCC at Johns Hopkins"],
      "Internal Name": ["AML-Ped_TARGET"],
      "Number of Samples": [200],
      "Posting Restriction": ["Link to data source"],
      "Species": ["Human"],
      "Tissue/Tumor": ["Blood"],
      "Type": ["GCD"],
      "abstract_file_path": ["/srv/www/htdocs/Foswiki/downloads/data/v2/abstract_files/pediatric_aml_target.txt"],
      "citation_file_path": ["/srv/www/htdocs/Foswiki/downloads/data/v2/citation_files/pediatric_aml_target.txt"],
      "creationDate": 12989453797121299001205984,
      "creator": "Soheil Meshinchi/ Bob Arceci",
      "db_id": [3],
      "description": null,
      "hasClinicalData": false,
      "hasExpressionData": false,
      "hasGeneticData": false,
      "id": "agxkZWZsYXV4LXRlc3RyEwsSDUdBRUpET0RhdGFzZXQYKwwag1kZWZsYXV4LXRlc3QychMLEg1HQUVKRE9EYXRhc2V0GCsM",
      "name": "Pediatric AML TARGET",
      "readme_file_path": ["/srv/www/htdocs/Foswiki/downloads/data/v2/readme_files/pediatric_aml_target.txt"],
      "releaseDate": null,
      "status": "Pending",
      "user_agreement_file_path": ["/srv/www/htdocs/Foswiki/downloads/data/v2/user_agreement_files/pediatric_aml_target.txt"],
      "version": "0.0.1"
    }
  ],
  "totalNumberOfResults": 114
}

...

Code Block
curl -i -H Accept:application/json 'http://localhost:8080/repo/v1/query?query=select+*+from+layer+where+dataset.id+==+"agxkZWZsYXV4LXRlc3RyFAsSDUdBRUpET0RhdGFzZXQYtAQMag1kZWZsYXV4LXRlc3QychQLEg1HQUVKRE9EYXRhc2V0GLQEDA"'

Response

Code Block
HTTP/1.1 200 OK
Content-Type: application/json
Transfer-Encoding: chunked
Server: Jetty(6.1.x)

{
  "results": [
    {
      "creationDate": 12989454364181299001249762,
      "description": "",
      "id": "agxkZWZsYXV4LXRlc3RyLwsSDUdBRUpET0RhdGFzZXQYtAQMCxIUR0FFSkRPSW5wdXREYXRhTGF5ZXIY3REMag1kZWZsYXV4LXRlc3Qyci8LEg1HQUVKRE9EYXRhc2V0GLQEDAsSFEdBRUpET0lucHV0RGF0YUxheWVyGOcRDA",
      "name": "expressiongenetic data",
      "platform": null,
      "processingFacility": null,
      "publicationDate": null,
      "qcBy": null,
      "qcDate": null,
      "releaseNotes": "",
      "tissueType": null,
      "type": "EG",
      "version": "0.0.1"
    },
    {
      "creationDate": 12989454411541299001249037,
      "description": "",
      "id": "agxkZWZsYXV4LXRlc3RyLwsSDUdBRUpET0RhdGFzZXQYtAQMCxIUR0FFSkRPSW5wdXREYXRhTGF5ZXIY5xEMag1kZWZsYXV4LXRlc3Qyci8LEg1HQUVKRE9EYXRhc2V0GLQEDAsSFEdBRUpET0lucHV0RGF0YUxheWVyGNMRDA",
      "name": "geneticclinical data",
      "platform": null,
      "processingFacility": null,
      "publicationDate": null,
      "qcBy": null,
      "qcDate": null,
      "releaseNotes": "",
      "tissueType": null,
      "type": "GC",
      "version": "0.0.1"
    },
    {
      "creationDate": 12989454336331299001249454,
      "description": "",
      "id": "agxkZWZsYXV4LXRlc3RyLwsSDUdBRUpET0RhdGFzZXQYtAQMCxIUR0FFSkRPSW5wdXREYXRhTGF5ZXIY0xEMag1kZWZsYXV4LXRlc3Qyci8LEg1HQUVKRE9EYXRhc2V0GLQEDAsSFEdBRUpET0lucHV0RGF0YUxheWVyGN0RDA",
      "name": "clinicalexpression data",
      "platform": null,
      "processingFacility": null,
      "publicationDate": null,
      "qcBy": null,
      "qcDate": null,
      "releaseNotes": "",
      "tissueType": null,
      "type": "CE",
      "version": "0.0.1"
    }
  ],
  "totalNumberOfResults": 3
}

...

Code Block
curl -i -H Accept:application/json 'http://localhost:8080/repo/v1/query?query=select+*+from+layer+where+dataset.id+==+"agxkZWZsYXV4LXRlc3RyFAsSDUdBRUpET0RhdGFzZXQYtAQMag1kZWZsYXV4LXRlc3QychQLEg1HQUVKRE9EYXRhc2V0GLQEDA"+ORDER+BY+"type"'

Response

Code Block
HTTP/1.1 200 OK
Content-Type: application/json
Transfer-Encoding: chunked
Server: Jetty(6.1.x)

{
  "results": [
    {
      "creationDate": 12989454336331299001249037,
      "description": "",
      "id": "agxkZWZsYXV4LXRlc3RyLwsSDUdBRUpET0RhdGFzZXQYtAQMCxIUR0FFSkRPSW5wdXREYXRhTGF5ZXIY0xEMag1kZWZsYXV4LXRlc3Qyci8LEg1HQUVKRE9EYXRhc2V0GLQEDAsSFEdBRUpET0lucHV0RGF0YUxheWVyGNMRDA",
      "name": "clinical data",
      "platform": null,
      "processingFacility": null,
      "publicationDate": null,
      "qcBy": null,
      "qcDate": null,
      "releaseNotes": "",
      "tissueType": null,
      "type": "C",
      "version": "0.0.1"
    },
    {
      "creationDate": 12989454364181299001249454,
      "description": "",
      "id": "agxkZWZsYXV4LXRlc3RyLwsSDUdBRUpET0RhdGFzZXQYtAQMCxIUR0FFSkRPSW5wdXREYXRhTGF5ZXIY3REMag1kZWZsYXV4LXRlc3Qyci8LEg1HQUVKRE9EYXRhc2V0GLQEDAsSFEdBRUpET0lucHV0RGF0YUxheWVyGN0RDA",
      "name": "expression data",
      "platform": null,
      "processingFacility": null,
      "publicationDate": null,
      "qcBy": null,
      "qcDate": null,
      "releaseNotes": "",
      "tissueType": null,
      "type": "E",
      "version": "0.0.1"
    },
    {
      "creationDate": 12989454411541299001249762,
      "description": "",
      "id": "agxkZWZsYXV4LXRlc3RyLwsSDUdBRUpET0RhdGFzZXQYtAQMCxIUR0FFSkRPSW5wdXREYXRhTGF5ZXIY5xEMag1kZWZsYXV4LXRlc3Qyci8LEg1HQUVKRE9EYXRhc2V0GLQEDAsSFEdBRUpET0lucHV0RGF0YUxheWVyGOcRDA",
      "name": "genetic data",
      "platform": null,
      "processingFacility": null,
      "publicationDate": null,
      "qcBy": null,
      "qcDate": null,
      "releaseNotes": "",
      "tissueType": null,
      "type": "G",
      "version": "0.0.1"
    }
  ],
  "totalNumberOfResults": 3
}

...

Code Block
HTTP/1.1 200 OK
Content-Type: application/json
Transfer-Encoding: chunked
Server: Jetty(6.1.x)

{
  "paging": {"next": "/repo/v1/dataset?offset=4&limit=3&sort=name&ascending=true"},
  "results": [
    {
      "annotations": "/repo/v1/dataset/agxkZWZsYXV4LXRlc3RyFAsSDUdBRUpET0RhdGFzZXQYoAsMag1kZWZsYXV4LXRlc3QychQLEg1HQUVKRE9EYXRhc2V0GKALDA/annotations",
      "creationDate": 12989454043561299001230853,
      "creator": "Stephen Friend",
      "description": null,
      "etag": "4634071001342902307",
      "hasClinicalData": false,
      "hasExpressionData": false,
      "hasGeneticData": false,
      "id": "agxkZWZsYXV4LXRlc3RyFAsSDUdBRUpET0RhdGFzZXQYoAsMag1kZWZsYXV4LXRlc3QychQLEg1HQUVKRE9EYXRhc2V0GKALDA",
      "layer": "/repo/v1/dataset/agxkZWZsYXV4LXRlc3RyFAsSDUdBRUpET0RhdGFzZXQYoAsMag1kZWZsYXV4LXRlc3QychQLEg1HQUVKRE9EYXRhc2V0GKALDA/layer",
      "name": "AML Nonresponders Cohort",
      "releaseDate": null,
      "status": "Future",
      "uri": "/repo/v1/dataset/agxkZWZsYXV4LXRlc3RyFAsSDUdBRUpET0RhdGFzZXQYoAsMag1kZWZsYXV4LXRlc3QychQLEg1HQUVKRE9EYXRhc2V0GKALDA",
      "version": "0.0.1"
    },
    {
      "annotations": "/repo/v1/dataset/agxkZWZsYXV4LXRlc3RyFAsSDUdBRUpET0RhdGFzZXQYzA4Mag1kZWZsYXV4LXRlc3QychQLEg1HQUVKRE9EYXRhc2V0GMwODA/annotations",
      "creationDate": 12989454110551299001236973,
      "creator": "TCGA",
      "description": null,
      "etag": "-10446409871688500776",
      "hasClinicalData": false,
      "hasExpressionData": false,
      "hasGeneticData": false,
      "id": "agxkZWZsYXV4LXRlc3RyFAsSDUdBRUpET0RhdGFzZXQYzA4Mag1kZWZsYXV4LXRlc3QychQLEg1HQUVKRE9EYXRhc2V0GMwODA",
      "layer": "/repo/v1/dataset/agxkZWZsYXV4LXRlc3RyFAsSDUdBRUpET0RhdGFzZXQYzA4Mag1kZWZsYXV4LXRlc3QychQLEg1HQUVKRE9EYXRhc2V0GMwODA/layer",
      "name": "AML TCGA",
      "releaseDate": null,
      "status": "Future",
      "uri": "/repo/v1/dataset/agxkZWZsYXV4LXRlc3RyFAsSDUdBRUpET0RhdGFzZXQYzA4Mag1kZWZsYXV4LXRlc3QychQLEg1HQUVKRE9EYXRhc2V0GMwODA",
      "version": "0.0.1"
    },
    {
      "annotations": "/repo/v1/dataset/agxkZWZsYXV4LXRlc3RyFAsSDUdBRUpET0RhdGFzZXQY5QMMag1kZWZsYXV4LXRlc3QychQLEg1HQUVKRE9EYXRhc2V0GOUDDA/annotations",
      "creationDate": 12989453890611299001215735,
      "creator": "Cookson",
      "description": null,
      "etag": "13559652041680410336",
      "hasClinicalData": false,
      "hasExpressionData": false,
      "hasGeneticData": false,
      "id": "agxkZWZsYXV4LXRlc3RyFAsSDUdBRUpET0RhdGFzZXQY5QMMag1kZWZsYXV4LXRlc3QychQLEg1HQUVKRE9EYXRhc2V0GOUDDA",
      "layer": "/repo/v1/dataset/agxkZWZsYXV4LXRlc3RyFAsSDUdBRUpET0RhdGFzZXQY5QMMag1kZWZsYXV4LXRlc3QychQLEg1HQUVKRE9EYXRhc2V0GOUDDA/layer",
      "name": "Asthma Human Lymphoblastoid Cell Lines",
      "releaseDate": null,
      "status": "Future",
      "uri": "/repo/v1/dataset/agxkZWZsYXV4LXRlc3RyFAsSDUdBRUpET0RhdGFzZXQY5QMMag1kZWZsYXV4LXRlc3QychQLEg1HQUVKRE9EYXRhc2V0GOUDDA",
      "version": "0.0.1"
    }
  ],
  "totalNumberOfResults": 114
}

...

Code Block
curl -i -H Accept:application/json 'http://localhost:8080/repo/v1/dataset/agxkZWZsYXV4LXRlc3RyFAsSDUdBRUpET0RhdGFzZXQYtAQMag1kZWZsYXV4LXRlc3QychQLEg1HQUVKRE9EYXRhc2V0GLQEDA'

Response

Code Block
HTTP/1.1 200 OK
Content-Type: application/json
ETag: -16065832621124285210
Transfer-Encoding: chunked
Server: Jetty(6.1.x)

{
  "annotations": "/repo/v1/dataset/agxkZWZsYXV4LXRlc3RyFAsSDUdBRUpET0RhdGFzZXQYtAQMag1kZWZsYXV4LXRlc3QychQLEg1HQUVKRE9EYXRhc2V0GLQEDA/annotations",
  "creationDate": 12989453904301299001217211,
  "creator": "Fred Guengrich/Steve Strom/ Erin Schuetz",
  "description": null,
  "etag": "-16065832621124285210",
  "hasClinicalData": true,
  "hasExpressionData": true,
  "hasGeneticData": true,
  "id": "agxkZWZsYXV4LXRlc3RyFAsSDUdBRUpET0RhdGFzZXQYtAQMag1kZWZsYXV4LXRlc3QychQLEg1HQUVKRE9EYXRhc2V0GLQEDA",
  "layer": "/repo/v1/dataset/agxkZWZsYXV4LXRlc3RyFAsSDUdBRUpET0RhdGFzZXQYtAQMag1kZWZsYXV4LXRlc3QychQLEg1HQUVKRE9EYXRhc2V0GLQEDA/layer",
  "name": "Human Liver Cohort",
  "releaseDate": null,
  "status": "Current",
  "uri": "/repo/v1/dataset/agxkZWZsYXV4LXRlc3RyFAsSDUdBRUpET0RhdGFzZXQYtAQMag1kZWZsYXV4LXRlc3QychQLEg1HQUVKRE9EYXRhc2V0GLQEDA",
  "version": "0.0.1"
}

Get Annotations for a Dataset

...

Code Block
curl -i -H Accept:application/json 'http://localhost:8080/repo/v1/dataset/agxkZWZsYXV4LXRlc3RyFAsSDUdBRUpET0RhdGFzZXQYtAQMag1kZWZsYXV4LXRlc3QychQLEg1HQUVKRE9EYXRhc2V0GLQEDA/annotations'

Response

Code Block
HTTP/1.1 200 OK
Content-Type: application/json
ETag: 413002292
Transfer-Encoding: chunked
Server: Jetty(6.1.x)

{
  "creationDate": null,
  "dateAnnotations": {},
  "doubleAnnotations": {},
  "etag": "413002292",
  "id": "agxkZWZsYXV4LXRlc3RyFAsSDUdBRUpET0RhdGFzZXQYtAQMag1kZWZsYXV4LXRlc3QychQLEg1HQUVKRE9EYXRhc2V0GLQEDA",
  "longAnnotations": {
    "Number of Samples": [517],
    "db_id": [29]
  },
  "stringAnnotations": {
    "Disease": ["CVD"],
    "Institution": ["Vanderbilt University/ University of Pittsburg/ StJudes Hospital"],
    "Internal Name": ["Deliver"],
    "Posting Restriction": ["Link to data source"],
    "Species": ["Human"],
    "Tissue/Tumor": ["Liver"],
    "Type": ["GCD"],
    "abstract_file_path": ["/srv/www/htdocs/Foswiki/downloads/data/v2/abstract_files/human_liver_cohort.txt"],
    "citation_file_path": ["/srv/www/htdocs/Foswiki/downloads/data/v2/citation_files/human_liver_cohort.txt"],
    "readme_file_path": ["/srv/www/htdocs/Foswiki/downloads/data/v2/readme_files/human_liver_cohort.txt"],
    "user_agreement_file_path": ["/srv/www/htdocs/Foswiki/downloads/data/v2/user_agreement_files/human_liver_cohort.txt"]
  },
  "uri": "/repo/v1/dataset/agxkZWZsYXV4LXRlc3RyFAsSDUdBRUpET0RhdGFzZXQYtAQMag1kZWZsYXV4LXRlc3QychQLEg1HQUVKRE9EYXRhc2V0GLQEDA/annotations"
}

Get all the Layers for a Dataset

...

Code Block
curl -i -H Accept:application/json 'http://localhost:8080/repo/v1/dataset/agxkZWZsYXV4LXRlc3RyFAsSDUdBRUpET0RhdGFzZXQYtAQMag1kZWZsYXV4LXRlc3QychQLEg1HQUVKRE9EYXRhc2V0GLQEDA/layer'

Response

Code Block
HTTP/1.1 200 OK
Content-Type: application/json
Transfer-Encoding: chunked
Server: Jetty(6.1.x)

{
  "paging": {},
  "results": [
    {
      "annotations": "/repo/v1/dataset/agxkZWZsYXV4LXRlc3RyFAsSDUdBRUpET0RhdGFzZXQYtAQMag1kZWZsYXV4LXRlc3QychQLEg1HQUVKRE9EYXRhc2V0GLQEDA/layer/agxkZWZsYXV4LXRlc3RyLwsSDUdBRUpET0RhdGFzZXQYtAQMCxIUR0FFSkRPSW5wdXREYXRhTGF5ZXIY3REMag1kZWZsYXV4LXRlc3Qyci8LEg1HQUVKRE9EYXRhc2V0GLQEDAsSFEdBRUpET0lucHV0RGF0YUxheWVyGOcRDA/annotations",
      "creationDate": 12989454364181299001249762,
      "description": "",
      "etag": "1368934515-1651402478",
      "id": "agxkZWZsYXV4LXRlc3RyLwsSDUdBRUpET0RhdGFzZXQYtAQMCxIUR0FFSkRPSW5wdXREYXRhTGF5ZXIY3REMag1kZWZsYXV4LXRlc3Qyci8LEg1HQUVKRE9EYXRhc2V0GLQEDAsSFEdBRUpET0lucHV0RGF0YUxheWVyGOcRDA",
      "locations": [
        "/repo/v1/dataset/agxkZWZsYXV4LXRlc3RyFAsSDUdBRUpET0RhdGFzZXQYtAQMag1kZWZsYXV4LXRlc3QychQLEg1HQUVKRE9EYXRhc2V0GLQEDA/layer/agxkZWZsYXV4LXRlc3RyLwsSDUdBRUpET0RhdGFzZXQYtAQMCxIUR0FFSkRPSW5wdXREYXRhTGF5ZXIY3REMag1kZWZsYXV4LXRlc3Qyci8LEg1HQUVKRE9EYXRhc2V0GLQEDAsSFEdBRUpET0lucHV0RGF0YUxheWVyGOcRDA/sageLocationawsS3Location",
        "/repo/v1/dataset/agxkZWZsYXV4LXRlc3RyFAsSDUdBRUpET0RhdGFzZXQYtAQMag1kZWZsYXV4LXRlc3QychQLEg1HQUVKRE9EYXRhc2V0GLQEDA/layer/agxkZWZsYXV4LXRlc3RyLwsSDUdBRUpET0RhdGFzZXQYtAQMCxIUR0FFSkRPSW5wdXREYXRhTGF5ZXIY3REMag1kZWZsYXV4LXRlc3Qyci8LEg1HQUVKRE9EYXRhc2V0GLQEDAsSFEdBRUpET0lucHV0RGF0YUxheWVyGOcRDA/awsEBSLocationsageLocation",
        "/repo/v1/dataset/agxkZWZsYXV4LXRlc3RyFAsSDUdBRUpET0RhdGFzZXQYtAQMag1kZWZsYXV4LXRlc3QychQLEg1HQUVKRE9EYXRhc2V0GLQEDA/layer/agxkZWZsYXV4LXRlc3RyLwsSDUdBRUpET0RhdGFzZXQYtAQMCxIUR0FFSkRPSW5wdXREYXRhTGF5ZXIY3REMag1kZWZsYXV4LXRlc3Qyci8LEg1HQUVKRE9EYXRhc2V0GLQEDAsSFEdBRUpET0lucHV0RGF0YUxheWVyGOcRDA/locations",
        "/repo/v1/dataset/agxkZWZsYXV4LXRlc3RyFAsSDUdBRUpET0RhdGFzZXQYtAQMag1kZWZsYXV4LXRlc3QychQLEg1HQUVKRE9EYXRhc2V0GLQEDA/layer/agxkZWZsYXV4LXRlc3RyLwsSDUdBRUpET0RhdGFzZXQYtAQMCxIUR0FFSkRPSW5wdXREYXRhTGF5ZXIY3REMag1kZWZsYXV4LXRlc3Qyci8LEg1HQUVKRE9EYXRhc2V0GLQEDAsSFEdBRUpET0lucHV0RGF0YUxheWVyGOcRDA/awsS3LocationawsEBSLocation"
      ],
      "name": "expressiongenetic data",
      "platform": null,
      "preview": "/repo/v1/dataset/agxkZWZsYXV4LXRlc3RyFAsSDUdBRUpET0RhdGFzZXQYtAQMag1kZWZsYXV4LXRlc3QychQLEg1HQUVKRE9EYXRhc2V0GLQEDA/layer/agxkZWZsYXV4LXRlc3RyLwsSDUdBRUpET0RhdGFzZXQYtAQMCxIUR0FFSkRPSW5wdXREYXRhTGF5ZXIY3REMag1kZWZsYXV4LXRlc3Qyci8LEg1HQUVKRE9EYXRhc2V0GLQEDAsSFEdBRUpET0lucHV0RGF0YUxheWVyGOcRDA/preview",
      "processingFacility": null,
      "publicationDate": null,
      "qcBy": null,
      "qcDate": null,
      "releaseNotes": "",
      "tissueType": null,
      "type": "EG",
      "uri": "/repo/v1/dataset/agxkZWZsYXV4LXRlc3RyFAsSDUdBRUpET0RhdGFzZXQYtAQMag1kZWZsYXV4LXRlc3QychQLEg1HQUVKRE9EYXRhc2V0GLQEDA/layer/agxkZWZsYXV4LXRlc3RyLwsSDUdBRUpET0RhdGFzZXQYtAQMCxIUR0FFSkRPSW5wdXREYXRhTGF5ZXIY3REMag1kZWZsYXV4LXRlc3Qyci8LEg1HQUVKRE9EYXRhc2V0GLQEDAsSFEdBRUpET0lucHV0RGF0YUxheWVyGOcRDA",
      "version": "0.0.1"
    },
    {
      "annotations": "/repo/v1/dataset/agxkZWZsYXV4LXRlc3RyFAsSDUdBRUpET0RhdGFzZXQYtAQMag1kZWZsYXV4LXRlc3QychQLEg1HQUVKRE9EYXRhc2V0GLQEDA/layer/agxkZWZsYXV4LXRlc3RyLwsSDUdBRUpET0RhdGFzZXQYtAQMCxIUR0FFSkRPSW5wdXREYXRhTGF5ZXIY5xEMag1kZWZsYXV4LXRlc3Qyci8LEg1HQUVKRE9EYXRhc2V0GLQEDAsSFEdBRUpET0lucHV0RGF0YUxheWVyGNMRDA/annotations",
      "creationDate": 12989454411541299001249037,
      "description": "",
      "etag": "-1673543886597453031",
      "id": "agxkZWZsYXV4LXRlc3RyLwsSDUdBRUpET0RhdGFzZXQYtAQMCxIUR0FFSkRPSW5wdXREYXRhTGF5ZXIY5xEMag1kZWZsYXV4LXRlc3Qyci8LEg1HQUVKRE9EYXRhc2V0GLQEDAsSFEdBRUpET0lucHV0RGF0YUxheWVyGNMRDA",
      "locations": [
        "/repo/v1/dataset/agxkZWZsYXV4LXRlc3RyFAsSDUdBRUpET0RhdGFzZXQYtAQMag1kZWZsYXV4LXRlc3QychQLEg1HQUVKRE9EYXRhc2V0GLQEDA/layer/agxkZWZsYXV4LXRlc3RyLwsSDUdBRUpET0RhdGFzZXQYtAQMCxIUR0FFSkRPSW5wdXREYXRhTGF5ZXIY5xEMag1kZWZsYXV4LXRlc3Qyci8LEg1HQUVKRE9EYXRhc2V0GLQEDAsSFEdBRUpET0lucHV0RGF0YUxheWVyGNMRDA/sageLocationlocations",
        "/repo/v1/dataset/agxkZWZsYXV4LXRlc3RyFAsSDUdBRUpET0RhdGFzZXQYtAQMag1kZWZsYXV4LXRlc3QychQLEg1HQUVKRE9EYXRhc2V0GLQEDA/layer/agxkZWZsYXV4LXRlc3RyLwsSDUdBRUpET0RhdGFzZXQYtAQMCxIUR0FFSkRPSW5wdXREYXRhTGF5ZXIY5xEMag1kZWZsYXV4LXRlc3Qyci8LEg1HQUVKRE9EYXRhc2V0GLQEDAsSFEdBRUpET0lucHV0RGF0YUxheWVyGNMRDA/awsS3LocationsageLocation",
        "/repo/v1/dataset/agxkZWZsYXV4LXRlc3RyFAsSDUdBRUpET0RhdGFzZXQYtAQMag1kZWZsYXV4LXRlc3QychQLEg1HQUVKRE9EYXRhc2V0GLQEDA/layer/agxkZWZsYXV4LXRlc3RyLwsSDUdBRUpET0RhdGFzZXQYtAQMCxIUR0FFSkRPSW5wdXREYXRhTGF5ZXIY5xEMag1kZWZsYXV4LXRlc3Qyci8LEg1HQUVKRE9EYXRhc2V0GLQEDAsSFEdBRUpET0lucHV0RGF0YUxheWVyGNMRDA/awsEBSLocation",
        "/repo/v1/dataset/agxkZWZsYXV4LXRlc3RyFAsSDUdBRUpET0RhdGFzZXQYtAQMag1kZWZsYXV4LXRlc3QychQLEg1HQUVKRE9EYXRhc2V0GLQEDA/layer/agxkZWZsYXV4LXRlc3RyLwsSDUdBRUpET0RhdGFzZXQYtAQMCxIUR0FFSkRPSW5wdXREYXRhTGF5ZXIY5xEMag1kZWZsYXV4LXRlc3Qyci8LEg1HQUVKRE9EYXRhc2V0GLQEDAsSFEdBRUpET0lucHV0RGF0YUxheWVyGNMRDA/locationsawsS3Location"
      ],
      "name": "geneticclinical data",
      "platform": null,
      "preview": "/repo/v1/dataset/agxkZWZsYXV4LXRlc3RyFAsSDUdBRUpET0RhdGFzZXQYtAQMag1kZWZsYXV4LXRlc3QychQLEg1HQUVKRE9EYXRhc2V0GLQEDA/layer/agxkZWZsYXV4LXRlc3RyLwsSDUdBRUpET0RhdGFzZXQYtAQMCxIUR0FFSkRPSW5wdXREYXRhTGF5ZXIY5xEMag1kZWZsYXV4LXRlc3Qyci8LEg1HQUVKRE9EYXRhc2V0GLQEDAsSFEdBRUpET0lucHV0RGF0YUxheWVyGNMRDA/preview",
      "processingFacility": null,
      "publicationDate": null,
      "qcBy": null,
      "qcDate": null,
      "releaseNotes": "",
      "tissueType": null,
      "type": "GC",
      "uri": "/repo/v1/dataset/agxkZWZsYXV4LXRlc3RyFAsSDUdBRUpET0RhdGFzZXQYtAQMag1kZWZsYXV4LXRlc3QychQLEg1HQUVKRE9EYXRhc2V0GLQEDA/layer/agxkZWZsYXV4LXRlc3RyLwsSDUdBRUpET0RhdGFzZXQYtAQMCxIUR0FFSkRPSW5wdXREYXRhTGF5ZXIY5xEMag1kZWZsYXV4LXRlc3Qyci8LEg1HQUVKRE9EYXRhc2V0GLQEDAsSFEdBRUpET0lucHV0RGF0YUxheWVyGNMRDA",
      "version": "0.0.1"
    },
    {
      "annotations": "/repo/v1/dataset/agxkZWZsYXV4LXRlc3RyFAsSDUdBRUpET0RhdGFzZXQYtAQMag1kZWZsYXV4LXRlc3QychQLEg1HQUVKRE9EYXRhc2V0GLQEDA/layer/agxkZWZsYXV4LXRlc3RyLwsSDUdBRUpET0RhdGFzZXQYtAQMCxIUR0FFSkRPSW5wdXREYXRhTGF5ZXIY0xEMag1kZWZsYXV4LXRlc3Qyci8LEg1HQUVKRE9EYXRhc2V0GLQEDAsSFEdBRUpET0lucHV0RGF0YUxheWVyGN0RDA/annotations",
      "creationDate": 12989454336331299001249454,
      "description": "",
      "etag": "-566282579306562719",
      "id": "agxkZWZsYXV4LXRlc3RyLwsSDUdBRUpET0RhdGFzZXQYtAQMCxIUR0FFSkRPSW5wdXREYXRhTGF5ZXIY0xEMag1kZWZsYXV4LXRlc3Qyci8LEg1HQUVKRE9EYXRhc2V0GLQEDAsSFEdBRUpET0lucHV0RGF0YUxheWVyGN0RDA",
      "locations": [
        "/repo/v1/dataset/agxkZWZsYXV4LXRlc3RyFAsSDUdBRUpET0RhdGFzZXQYtAQMag1kZWZsYXV4LXRlc3QychQLEg1HQUVKRE9EYXRhc2V0GLQEDA/layer/agxkZWZsYXV4LXRlc3RyLwsSDUdBRUpET0RhdGFzZXQYtAQMCxIUR0FFSkRPSW5wdXREYXRhTGF5ZXIY0xEMag1kZWZsYXV4LXRlc3Qyci8LEg1HQUVKRE9EYXRhc2V0GLQEDAsSFEdBRUpET0lucHV0RGF0YUxheWVyGN0RDA/awsEBSLocation",
        "/repo/v1/dataset/agxkZWZsYXV4LXRlc3RyFAsSDUdBRUpET0RhdGFzZXQYtAQMag1kZWZsYXV4LXRlc3QychQLEg1HQUVKRE9EYXRhc2V0GLQEDA/layer/agxkZWZsYXV4LXRlc3RyLwsSDUdBRUpET0RhdGFzZXQYtAQMCxIUR0FFSkRPSW5wdXREYXRhTGF5ZXIY0xEMag1kZWZsYXV4LXRlc3Qyci8LEg1HQUVKRE9EYXRhc2V0GLQEDAsSFEdBRUpET0lucHV0RGF0YUxheWVyGN0RDA/locations",
        "/repo/v1/dataset/agxkZWZsYXV4LXRlc3RyFAsSDUdBRUpET0RhdGFzZXQYtAQMag1kZWZsYXV4LXRlc3QychQLEg1HQUVKRE9EYXRhc2V0GLQEDA/layer/agxkZWZsYXV4LXRlc3RyLwsSDUdBRUpET0RhdGFzZXQYtAQMCxIUR0FFSkRPSW5wdXREYXRhTGF5ZXIY0xEMag1kZWZsYXV4LXRlc3Qyci8LEg1HQUVKRE9EYXRhc2V0GLQEDAsSFEdBRUpET0lucHV0RGF0YUxheWVyGN0RDA/awsS3LocationsageLocation",
        "/repo/v1/dataset/agxkZWZsYXV4LXRlc3RyFAsSDUdBRUpET0RhdGFzZXQYtAQMag1kZWZsYXV4LXRlc3QychQLEg1HQUVKRE9EYXRhc2V0GLQEDA/layer/agxkZWZsYXV4LXRlc3RyLwsSDUdBRUpET0RhdGFzZXQYtAQMCxIUR0FFSkRPSW5wdXREYXRhTGF5ZXIY0xEMag1kZWZsYXV4LXRlc3Qyci8LEg1HQUVKRE9EYXRhc2V0GLQEDAsSFEdBRUpET0lucHV0RGF0YUxheWVyGN0RDA/sageLocationawsS3Location"
      ],
      "name": "clinicalexpression data",
      "platform": null,
      "preview": "/repo/v1/dataset/agxkZWZsYXV4LXRlc3RyFAsSDUdBRUpET0RhdGFzZXQYtAQMag1kZWZsYXV4LXRlc3QychQLEg1HQUVKRE9EYXRhc2V0GLQEDA/layer/agxkZWZsYXV4LXRlc3RyLwsSDUdBRUpET0RhdGFzZXQYtAQMCxIUR0FFSkRPSW5wdXREYXRhTGF5ZXIY0xEMag1kZWZsYXV4LXRlc3Qyci8LEg1HQUVKRE9EYXRhc2V0GLQEDAsSFEdBRUpET0lucHV0RGF0YUxheWVyGN0RDA/preview",
      "processingFacility": null,
      "publicationDate": null,
      "qcBy": null,
      "qcDate": null,
      "releaseNotes": "",
      "tissueType": null,
      "type": "CE",
      "uri": "/repo/v1/dataset/agxkZWZsYXV4LXRlc3RyFAsSDUdBRUpET0RhdGFzZXQYtAQMag1kZWZsYXV4LXRlc3QychQLEg1HQUVKRE9EYXRhc2V0GLQEDA/layer/agxkZWZsYXV4LXRlc3RyLwsSDUdBRUpET0RhdGFzZXQYtAQMCxIUR0FFSkRPSW5wdXREYXRhTGF5ZXIY0xEMag1kZWZsYXV4LXRlc3Qyci8LEg1HQUVKRE9EYXRhc2V0GLQEDAsSFEdBRUpET0lucHV0RGF0YUxheWVyGN0RDA",
      "version": "0.0.1"
    }
  ],
  "totalNumberOfResults": 3
}

Get a

...

Genetic Dataset Layer

This returns the metadata for a dataset layer.

...

Code Block
curl -i -H Accept:application/json 'http://localhost:8080/repo/v1/dataset/agxkZWZsYXV4LXRlc3RyFAsSDUdBRUpET0RhdGFzZXQYtAQMag1kZWZsYXV4LXRlc3QychQLEg1HQUVKRE9EYXRhc2V0GLQEDA/layer/agxkZWZsYXV4LXRlc3RyLwsSDUdBRUpET0RhdGFzZXQYtAQMCxIUR0FFSkRPSW5wdXREYXRhTGF5ZXIY3REMag1kZWZsYXV4LXRlc3Qyci8LEg1HQUVKRE9EYXRhc2V0GLQEDAsSFEdBRUpET0lucHV0RGF0YUxheWVyGOcRDA'

Response

Code Block
HTTP/1.1 200 OK
Content-Type: application/json
ETag: 1368934515-1651402478
Transfer-Encoding: chunked
Server: Jetty(6.1.x)

{
  "annotations": "/repo/v1/dataset/agxkZWZsYXV4LXRlc3RyFAsSDUdBRUpET0RhdGFzZXQYtAQMag1kZWZsYXV4LXRlc3QychQLEg1HQUVKRE9EYXRhc2V0GLQEDA/layer/agxkZWZsYXV4LXRlc3RyLwsSDUdBRUpET0RhdGFzZXQYtAQMCxIUR0FFSkRPSW5wdXREYXRhTGF5ZXIY3REMag1kZWZsYXV4LXRlc3Qyci8LEg1HQUVKRE9EYXRhc2V0GLQEDAsSFEdBRUpET0lucHV0RGF0YUxheWVyGOcRDA/annotations",
  "creationDate": 12989454364181299001249762,
  "description": "",
  "etag": "1368934515-1651402478",
  "id": "agxkZWZsYXV4LXRlc3RyLwsSDUdBRUpET0RhdGFzZXQYtAQMCxIUR0FFSkRPSW5wdXREYXRhTGF5ZXIY3REMag1kZWZsYXV4LXRlc3Qyci8LEg1HQUVKRE9EYXRhc2V0GLQEDAsSFEdBRUpET0lucHV0RGF0YUxheWVyGOcRDA",
  "locations": [
    "/repo/v1/dataset/agxkZWZsYXV4LXRlc3RyFAsSDUdBRUpET0RhdGFzZXQYtAQMag1kZWZsYXV4LXRlc3QychQLEg1HQUVKRE9EYXRhc2V0GLQEDA/layer/agxkZWZsYXV4LXRlc3RyLwsSDUdBRUpET0RhdGFzZXQYtAQMCxIUR0FFSkRPSW5wdXREYXRhTGF5ZXIY3REMag1kZWZsYXV4LXRlc3Qyci8LEg1HQUVKRE9EYXRhc2V0GLQEDAsSFEdBRUpET0lucHV0RGF0YUxheWVyGOcRDA/sageLocationawsS3Location",
    "/repo/v1/dataset/agxkZWZsYXV4LXRlc3RyFAsSDUdBRUpET0RhdGFzZXQYtAQMag1kZWZsYXV4LXRlc3QychQLEg1HQUVKRE9EYXRhc2V0GLQEDA/layer/agxkZWZsYXV4LXRlc3RyLwsSDUdBRUpET0RhdGFzZXQYtAQMCxIUR0FFSkRPSW5wdXREYXRhTGF5ZXIY3REMag1kZWZsYXV4LXRlc3Qyci8LEg1HQUVKRE9EYXRhc2V0GLQEDAsSFEdBRUpET0lucHV0RGF0YUxheWVyGOcRDA/awsEBSLocationsageLocation",
    "/repo/v1/dataset/agxkZWZsYXV4LXRlc3RyFAsSDUdBRUpET0RhdGFzZXQYtAQMag1kZWZsYXV4LXRlc3QychQLEg1HQUVKRE9EYXRhc2V0GLQEDA/layer/agxkZWZsYXV4LXRlc3RyLwsSDUdBRUpET0RhdGFzZXQYtAQMCxIUR0FFSkRPSW5wdXREYXRhTGF5ZXIY3REMag1kZWZsYXV4LXRlc3Qyci8LEg1HQUVKRE9EYXRhc2V0GLQEDAsSFEdBRUpET0lucHV0RGF0YUxheWVyGOcRDA/locations",
    "/repo/v1/dataset/agxkZWZsYXV4LXRlc3RyFAsSDUdBRUpET0RhdGFzZXQYtAQMag1kZWZsYXV4LXRlc3QychQLEg1HQUVKRE9EYXRhc2V0GLQEDA/layer/agxkZWZsYXV4LXRlc3RyLwsSDUdBRUpET0RhdGFzZXQYtAQMCxIUR0FFSkRPSW5wdXREYXRhTGF5ZXIY3REMag1kZWZsYXV4LXRlc3Qyci8LEg1HQUVKRE9EYXRhc2V0GLQEDAsSFEdBRUpET0lucHV0RGF0YUxheWVyGOcRDA/awsS3LocationawsEBSLocation"
  ],
  "name": "expressiongenetic data",
  "platform": null,
  "preview": "/repo/v1/dataset/agxkZWZsYXV4LXRlc3RyFAsSDUdBRUpET0RhdGFzZXQYtAQMag1kZWZsYXV4LXRlc3QychQLEg1HQUVKRE9EYXRhc2V0GLQEDA/layer/agxkZWZsYXV4LXRlc3RyLwsSDUdBRUpET0RhdGFzZXQYtAQMCxIUR0FFSkRPSW5wdXREYXRhTGF5ZXIY3REMag1kZWZsYXV4LXRlc3Qyci8LEg1HQUVKRE9EYXRhc2V0GLQEDAsSFEdBRUpET0lucHV0RGF0YUxheWVyGOcRDA/preview",
  "processingFacility": null,
  "publicationDate": null,
  "qcBy": null,
  "qcDate": null,
  "releaseNotes": "",
  "tissueType": null,
  "type": "EG",
  "uri": "/repo/v1/dataset/agxkZWZsYXV4LXRlc3RyFAsSDUdBRUpET0RhdGFzZXQYtAQMag1kZWZsYXV4LXRlc3QychQLEg1HQUVKRE9EYXRhc2V0GLQEDA/layer/agxkZWZsYXV4LXRlc3RyLwsSDUdBRUpET0RhdGFzZXQYtAQMCxIUR0FFSkRPSW5wdXREYXRhTGF5ZXIY3REMag1kZWZsYXV4LXRlc3Qyci8LEg1HQUVKRE9EYXRhc2V0GLQEDAsSFEdBRUpET0lucHV0RGF0YUxheWVyGOcRDA",
  "version": "0.0.1"
}

Get Annotations for a

...

Genetic Dataset Layer

This returns the annotations for a dataset layer.

...

Code Block
curl -i -H Accept:application/json 'http://localhost:8080/repo/v1/dataset/agxkZWZsYXV4LXRlc3RyFAsSDUdBRUpET0RhdGFzZXQYtAQMag1kZWZsYXV4LXRlc3QychQLEg1HQUVKRE9EYXRhc2V0GLQEDA/layer/agxkZWZsYXV4LXRlc3RyLwsSDUdBRUpET0RhdGFzZXQYtAQMCxIUR0FFSkRPSW5wdXREYXRhTGF5ZXIY3REMag1kZWZsYXV4LXRlc3Qyci8LEg1HQUVKRE9EYXRhc2V0GLQEDAsSFEdBRUpET0lucHV0RGF0YUxheWVyGOcRDA/annotations'

Response

Code Block
HTTP/1.1 200 OK
Content-Type: application/json
ETag: 923521
Transfer-Encoding: chunked
Server: Jetty(6.1.x)

{
  "creationDate": null,
  "dateAnnotations": {},
  "doubleAnnotations": {},
  "etag": "923521",
  "id": "agxkZWZsYXV4LXRlc3RyLwsSDUdBRUpET0RhdGFzZXQYtAQMCxIUR0FFSkRPSW5wdXREYXRhTGF5ZXIY3REMag1kZWZsYXV4LXRlc3Qyci8LEg1HQUVKRE9EYXRhc2V0GLQEDAsSFEdBRUpET0lucHV0RGF0YUxheWVyGOcRDA",
  "longAnnotations": {},
  "stringAnnotations": {},
  "uri": "/repo/v1/dataset/agxkZWZsYXV4LXRlc3RyFAsSDUdBRUpET0RhdGFzZXQYtAQMag1kZWZsYXV4LXRlc3QychQLEg1HQUVKRE9EYXRhc2V0GLQEDA/layer/agxkZWZsYXV4LXRlc3RyLwsSDUdBRUpET0RhdGFzZXQYtAQMCxIUR0FFSkRPSW5wdXREYXRhTGF5ZXIY3REMag1kZWZsYXV4LXRlc3Qyci8LEg1HQUVKRE9EYXRhc2V0GLQEDAsSFEdBRUpET0lucHV0RGF0YUxheWVyGOcRDA/annotations"
}

Get preview data for a

...

Genetic Dataset Layer

This returns the preview data for a dataset layer.

...

Code Block
curl -i -H Accept:application/json 'http://localhost:8080/repo/v1/dataset/agxkZWZsYXV4LXRlc3RyFAsSDUdBRUpET0RhdGFzZXQYtAQMag1kZWZsYXV4LXRlc3QychQLEg1HQUVKRE9EYXRhc2V0GLQEDA/layer/agxkZWZsYXV4LXRlc3RyLwsSDUdBRUpET0RhdGFzZXQYtAQMCxIUR0FFSkRPSW5wdXREYXRhTGF5ZXIY3REMag1kZWZsYXV4LXRlc3Qyci8LEg1HQUVKRE9EYXRhc2V0GLQEDAsSFEdBRUpET0lucHV0RGF0YUxheWVyGOcRDA/preview'

Response

Code Block
HTTP/1.1 200 OK
Content-Type: application/json
ETag: 945969657246848728
Transfer-Encoding: chunked
Server: Jetty(6.1.x)

{
  "etag": "945969657246848728",
  "id": "agxkZWZsYXV4LXRlc3RyLwsSDUdBRUpET0RhdGFzZXQYtAQMCxIUR0FFSkRPSW5wdXREYXRhTGF5ZXIY3REMag1kZWZsYXV4LXRlc3Qyci8LEg1HQUVKRE9EYXRhc2V0GLQEDAsSFEdBRUpET0lucHV0RGF0YUxheWVyGOcRDA",
  "preview": "expressiongenetic data preview",
  "uri": "/repo/v1/dataset/agxkZWZsYXV4LXRlc3RyFAsSDUdBRUpET0RhdGFzZXQYtAQMag1kZWZsYXV4LXRlc3QychQLEg1HQUVKRE9EYXRhc2V0GLQEDA/layer/agxkZWZsYXV4LXRlc3RyLwsSDUdBRUpET0RhdGFzZXQYtAQMCxIUR0FFSkRPSW5wdXREYXRhTGF5ZXIY3REMag1kZWZsYXV4LXRlc3Qyci8LEg1HQUVKRE9EYXRhc2V0GLQEDAsSFEdBRUpET0lucHV0RGF0YUxheWVyGOcRDA/preview"
}

Get the

...

awsS3Location for a

...

Genetic Dataset Layer

This returns the location data for a dataset layer.

...

Code Block
curl -i -H Accept:application/json 'http://localhost:8080/repo/v1/dataset/agxkZWZsYXV4LXRlc3RyFAsSDUdBRUpET0RhdGFzZXQYtAQMag1kZWZsYXV4LXRlc3QychQLEg1HQUVKRE9EYXRhc2V0GLQEDA/layer/agxkZWZsYXV4LXRlc3RyLwsSDUdBRUpET0RhdGFzZXQYtAQMCxIUR0FFSkRPSW5wdXREYXRhTGF5ZXIY3REMag1kZWZsYXV4LXRlc3Qyci8LEg1HQUVKRE9EYXRhc2V0GLQEDAsSFEdBRUpET0lucHV0RGF0YUxheWVyGOcRDA/sageLocationawsS3Location'

Response

Code Block
HTTP/1.1 200403 OKForbidden
Content-Type: application/json
Transfer-Encoding: chunked
Server: Jetty(6.1.x)

{
  "pathreason": "/Shares/external-data/DAT_030__human_liver_cohort",
  "type": "sage"
You are not authorized to access the requested resource and/or perform the requested activity"}

Get the

...

sageLocation for a

...

Genetic Dataset Layer

This returns the location data for a dataset layer.

...

Code Block
curl -i -H Accept:application/json 'http://localhost:8080/repo/v1/dataset/agxkZWZsYXV4LXRlc3RyFAsSDUdBRUpET0RhdGFzZXQYtAQMag1kZWZsYXV4LXRlc3QychQLEg1HQUVKRE9EYXRhc2V0GLQEDA/layer/agxkZWZsYXV4LXRlc3RyLwsSDUdBRUpET0RhdGFzZXQYtAQMCxIUR0FFSkRPSW5wdXREYXRhTGF5ZXIY3REMag1kZWZsYXV4LXRlc3Qyci8LEg1HQUVKRE9EYXRhc2V0GLQEDAsSFEdBRUpET0lucHV0RGF0YUxheWVyGOcRDA/awsEBSLocationsageLocation'

Response

Code Block
HTTP/1.1 200 OK
Content-Type: application/json
Transfer-Encoding: chunked
Server: Jetty(6.1.x)

{
  "path": "snap-29d33a42 (US West)/Shares/external-data/DAT_030__human_liver_cohort",
  "type": "awsebssage"
}

Get the

...

awsEBSLocation for a

...

Genetic Dataset Layer

This returns the location data for a dataset layer.

...

Code Block
curl -i -H Accept:application/json 'http://localhost:8080/repo/v1/dataset/agxkZWZsYXV4LXRlc3RyFAsSDUdBRUpET0RhdGFzZXQYtAQMag1kZWZsYXV4LXRlc3QychQLEg1HQUVKRE9EYXRhc2V0GLQEDA/layer/agxkZWZsYXV4LXRlc3RyLwsSDUdBRUpET0RhdGFzZXQYtAQMCxIUR0FFSkRPSW5wdXREYXRhTGF5ZXIY3REMag1kZWZsYXV4LXRlc3Qyci8LEg1HQUVKRE9EYXRhc2V0GLQEDAsSFEdBRUpET0lucHV0RGF0YUxheWVyGOcRDA/awsS3LocationawsEBSLocation'

Response

Code Block
HTTP/1.1 403200 ForbiddenOK
Content-Type: application/json
Transfer-Encoding: chunked
Server: Jetty(6.1.x)

{
  "reasonpath": "You are not authorized to access the requested resource and/or perform the requested activity"snap_29d33a42 (US West)",
  "type": "awsebs"
}

Get a

...

Clinical Dataset Layer

This returns the metadata for a dataset layer.

...

Code Block
curl -i -H Accept:application/json 'http://localhost:8080/repo/v1/dataset/agxkZWZsYXV4LXRlc3RyFAsSDUdBRUpET0RhdGFzZXQYtAQMag1kZWZsYXV4LXRlc3QychQLEg1HQUVKRE9EYXRhc2V0GLQEDA/layer/agxkZWZsYXV4LXRlc3RyLwsSDUdBRUpET0RhdGFzZXQYtAQMCxIUR0FFSkRPSW5wdXREYXRhTGF5ZXIY5xEMag1kZWZsYXV4LXRlc3Qyci8LEg1HQUVKRE9EYXRhc2V0GLQEDAsSFEdBRUpET0lucHV0RGF0YUxheWVyGNMRDA'

Response

Code Block
HTTP/1.1 200 OK
Content-Type: application/json
ETag: -1673543886597453031
Transfer-Encoding: chunked
Server: Jetty(6.1.x)

{
  "annotations": "/repo/v1/dataset/agxkZWZsYXV4LXRlc3RyFAsSDUdBRUpET0RhdGFzZXQYtAQMag1kZWZsYXV4LXRlc3QychQLEg1HQUVKRE9EYXRhc2V0GLQEDA/layer/agxkZWZsYXV4LXRlc3RyLwsSDUdBRUpET0RhdGFzZXQYtAQMCxIUR0FFSkRPSW5wdXREYXRhTGF5ZXIY5xEMag1kZWZsYXV4LXRlc3Qyci8LEg1HQUVKRE9EYXRhc2V0GLQEDAsSFEdBRUpET0lucHV0RGF0YUxheWVyGNMRDA/annotations",
  "creationDate": 12989454411541299001249037,
  "description": "",
  "etag": "-1673543886597453031",
  "id": "agxkZWZsYXV4LXRlc3RyLwsSDUdBRUpET0RhdGFzZXQYtAQMCxIUR0FFSkRPSW5wdXREYXRhTGF5ZXIY5xEMag1kZWZsYXV4LXRlc3Qyci8LEg1HQUVKRE9EYXRhc2V0GLQEDAsSFEdBRUpET0lucHV0RGF0YUxheWVyGNMRDA",
  "locations": [
    "/repo/v1/dataset/agxkZWZsYXV4LXRlc3RyFAsSDUdBRUpET0RhdGFzZXQYtAQMag1kZWZsYXV4LXRlc3QychQLEg1HQUVKRE9EYXRhc2V0GLQEDA/layer/agxkZWZsYXV4LXRlc3RyLwsSDUdBRUpET0RhdGFzZXQYtAQMCxIUR0FFSkRPSW5wdXREYXRhTGF5ZXIY5xEMag1kZWZsYXV4LXRlc3Qyci8LEg1HQUVKRE9EYXRhc2V0GLQEDAsSFEdBRUpET0lucHV0RGF0YUxheWVyGNMRDA/sageLocationlocations",
    "/repo/v1/dataset/agxkZWZsYXV4LXRlc3RyFAsSDUdBRUpET0RhdGFzZXQYtAQMag1kZWZsYXV4LXRlc3QychQLEg1HQUVKRE9EYXRhc2V0GLQEDA/layer/agxkZWZsYXV4LXRlc3RyLwsSDUdBRUpET0RhdGFzZXQYtAQMCxIUR0FFSkRPSW5wdXREYXRhTGF5ZXIY5xEMag1kZWZsYXV4LXRlc3Qyci8LEg1HQUVKRE9EYXRhc2V0GLQEDAsSFEdBRUpET0lucHV0RGF0YUxheWVyGNMRDA/awsS3LocationsageLocation",
    "/repo/v1/dataset/agxkZWZsYXV4LXRlc3RyFAsSDUdBRUpET0RhdGFzZXQYtAQMag1kZWZsYXV4LXRlc3QychQLEg1HQUVKRE9EYXRhc2V0GLQEDA/layer/agxkZWZsYXV4LXRlc3RyLwsSDUdBRUpET0RhdGFzZXQYtAQMCxIUR0FFSkRPSW5wdXREYXRhTGF5ZXIY5xEMag1kZWZsYXV4LXRlc3Qyci8LEg1HQUVKRE9EYXRhc2V0GLQEDAsSFEdBRUpET0lucHV0RGF0YUxheWVyGNMRDA/awsEBSLocation",
    "/repo/v1/dataset/agxkZWZsYXV4LXRlc3RyFAsSDUdBRUpET0RhdGFzZXQYtAQMag1kZWZsYXV4LXRlc3QychQLEg1HQUVKRE9EYXRhc2V0GLQEDA/layer/agxkZWZsYXV4LXRlc3RyLwsSDUdBRUpET0RhdGFzZXQYtAQMCxIUR0FFSkRPSW5wdXREYXRhTGF5ZXIY5xEMag1kZWZsYXV4LXRlc3Qyci8LEg1HQUVKRE9EYXRhc2V0GLQEDAsSFEdBRUpET0lucHV0RGF0YUxheWVyGNMRDA/locationsawsS3Location"
  ],
  "name": "geneticclinical data",
  "platform": null,
  "preview": "/repo/v1/dataset/agxkZWZsYXV4LXRlc3RyFAsSDUdBRUpET0RhdGFzZXQYtAQMag1kZWZsYXV4LXRlc3QychQLEg1HQUVKRE9EYXRhc2V0GLQEDA/layer/agxkZWZsYXV4LXRlc3RyLwsSDUdBRUpET0RhdGFzZXQYtAQMCxIUR0FFSkRPSW5wdXREYXRhTGF5ZXIY5xEMag1kZWZsYXV4LXRlc3Qyci8LEg1HQUVKRE9EYXRhc2V0GLQEDAsSFEdBRUpET0lucHV0RGF0YUxheWVyGNMRDA/preview",
  "processingFacility": null,
  "publicationDate": null,
  "qcBy": null,
  "qcDate": null,
  "releaseNotes": "",
  "tissueType": null,
  "type": "GC",
  "uri": "/repo/v1/dataset/agxkZWZsYXV4LXRlc3RyFAsSDUdBRUpET0RhdGFzZXQYtAQMag1kZWZsYXV4LXRlc3QychQLEg1HQUVKRE9EYXRhc2V0GLQEDA/layer/agxkZWZsYXV4LXRlc3RyLwsSDUdBRUpET0RhdGFzZXQYtAQMCxIUR0FFSkRPSW5wdXREYXRhTGF5ZXIY5xEMag1kZWZsYXV4LXRlc3Qyci8LEg1HQUVKRE9EYXRhc2V0GLQEDAsSFEdBRUpET0lucHV0RGF0YUxheWVyGNMRDA",
  "version": "0.0.1"
}

Get Annotations for a

...

Clinical Dataset Layer

This returns the annotations for a dataset layer.

...

Code Block
curl -i -H Accept:application/json 'http://localhost:8080/repo/v1/dataset/agxkZWZsYXV4LXRlc3RyFAsSDUdBRUpET0RhdGFzZXQYtAQMag1kZWZsYXV4LXRlc3QychQLEg1HQUVKRE9EYXRhc2V0GLQEDA/layer/agxkZWZsYXV4LXRlc3RyLwsSDUdBRUpET0RhdGFzZXQYtAQMCxIUR0FFSkRPSW5wdXREYXRhTGF5ZXIY5xEMag1kZWZsYXV4LXRlc3Qyci8LEg1HQUVKRE9EYXRhc2V0GLQEDAsSFEdBRUpET0lucHV0RGF0YUxheWVyGNMRDA/annotations'

Response

Code Block
HTTP/1.1 200 OK
Content-Type: application/json
ETag: 923521
Transfer-Encoding: chunked
Server: Jetty(6.1.x)

{
  "creationDate": null,
  "dateAnnotations": {},
  "doubleAnnotations": {},
  "etag": "923521",
  "id": "agxkZWZsYXV4LXRlc3RyLwsSDUdBRUpET0RhdGFzZXQYtAQMCxIUR0FFSkRPSW5wdXREYXRhTGF5ZXIY5xEMag1kZWZsYXV4LXRlc3Qyci8LEg1HQUVKRE9EYXRhc2V0GLQEDAsSFEdBRUpET0lucHV0RGF0YUxheWVyGNMRDA",
  "longAnnotations": {},
  "stringAnnotations": {},
  "uri": "/repo/v1/dataset/agxkZWZsYXV4LXRlc3RyFAsSDUdBRUpET0RhdGFzZXQYtAQMag1kZWZsYXV4LXRlc3QychQLEg1HQUVKRE9EYXRhc2V0GLQEDA/layer/agxkZWZsYXV4LXRlc3RyLwsSDUdBRUpET0RhdGFzZXQYtAQMCxIUR0FFSkRPSW5wdXREYXRhTGF5ZXIY5xEMag1kZWZsYXV4LXRlc3Qyci8LEg1HQUVKRE9EYXRhc2V0GLQEDAsSFEdBRUpET0lucHV0RGF0YUxheWVyGNMRDA/annotations"
}

Get preview data for a

...

Clinical Dataset Layer

This returns the preview data for a dataset layer.

...

Code Block
curl -i -H Accept:application/json 'http://localhost:8080/repo/v1/dataset/agxkZWZsYXV4LXRlc3RyFAsSDUdBRUpET0RhdGFzZXQYtAQMag1kZWZsYXV4LXRlc3QychQLEg1HQUVKRE9EYXRhc2V0GLQEDA/layer/agxkZWZsYXV4LXRlc3RyLwsSDUdBRUpET0RhdGFzZXQYtAQMCxIUR0FFSkRPSW5wdXREYXRhTGF5ZXIY5xEMag1kZWZsYXV4LXRlc3Qyci8LEg1HQUVKRE9EYXRhc2V0GLQEDAsSFEdBRUpET0lucHV0RGF0YUxheWVyGNMRDA/preview'

Response

Code Block
HTTP/1.1 200 OK
Content-Type: application/json
ETag: 246848728345556318
Transfer-Encoding: chunked
Server: Jetty(6.1.x)

{
  "etag": "246848728345556318",
  "id": "agxkZWZsYXV4LXRlc3RyLwsSDUdBRUpET0RhdGFzZXQYtAQMCxIUR0FFSkRPSW5wdXREYXRhTGF5ZXIY5xEMag1kZWZsYXV4LXRlc3Qyci8LEg1HQUVKRE9EYXRhc2V0GLQEDAsSFEdBRUpET0lucHV0RGF0YUxheWVyGNMRDA",
  "preview": "geneticclinical data preview",
  "uri": "/repo/v1/dataset/agxkZWZsYXV4LXRlc3RyFAsSDUdBRUpET0RhdGFzZXQYtAQMag1kZWZsYXV4LXRlc3QychQLEg1HQUVKRE9EYXRhc2V0GLQEDA/layer/agxkZWZsYXV4LXRlc3RyLwsSDUdBRUpET0RhdGFzZXQYtAQMCxIUR0FFSkRPSW5wdXREYXRhTGF5ZXIY5xEMag1kZWZsYXV4LXRlc3Qyci8LEg1HQUVKRE9EYXRhc2V0GLQEDAsSFEdBRUpET0lucHV0RGF0YUxheWVyGNMRDA/preview"
}

Get the sageLocation for a

...

Clinical Dataset Layer

This returns the location data for a dataset layer.

...

Code Block
curl -i -H Accept:application/json 'http://localhost:8080/repo/v1/dataset/agxkZWZsYXV4LXRlc3RyFAsSDUdBRUpET0RhdGFzZXQYtAQMag1kZWZsYXV4LXRlc3QychQLEg1HQUVKRE9EYXRhc2V0GLQEDA/layer/agxkZWZsYXV4LXRlc3RyLwsSDUdBRUpET0RhdGFzZXQYtAQMCxIUR0FFSkRPSW5wdXREYXRhTGF5ZXIY5xEMag1kZWZsYXV4LXRlc3Qyci8LEg1HQUVKRE9EYXRhc2V0GLQEDAsSFEdBRUpET0lucHV0RGF0YUxheWVyGNMRDA/sageLocation'

Response

Code Block
HTTP/1.1 200 OK
Content-Type: application/json
Transfer-Encoding: chunked
Server: Jetty(6.1.x)

{
  "path": "/Shares/external-data/DAT_030__human_liver_cohort",
  "type": "sage"
}

Get the

...

awsEBSLocation for a

...

Clinical Dataset Layer

This returns the location data for a dataset layer.

...

Code Block
curl -i -H Accept:application/json 'http://localhost:8080/repo/v1/dataset/agxkZWZsYXV4LXRlc3RyFAsSDUdBRUpET0RhdGFzZXQYtAQMag1kZWZsYXV4LXRlc3QychQLEg1HQUVKRE9EYXRhc2V0GLQEDA/layer/agxkZWZsYXV4LXRlc3RyLwsSDUdBRUpET0RhdGFzZXQYtAQMCxIUR0FFSkRPSW5wdXREYXRhTGF5ZXIY5xEMag1kZWZsYXV4LXRlc3Qyci8LEg1HQUVKRE9EYXRhc2V0GLQEDAsSFEdBRUpET0lucHV0RGF0YUxheWVyGNMRDA/awsS3LocationawsEBSLocation'

Response

Code Block
HTTP/1.1 403200 ForbiddenOK
Content-Type: application/json
Transfer-Encoding: chunked
Server: Jetty(6.1.x)

{
  "reasonpath": "You are not authorized to access the requested resource and/or perform the requested activity"snap-29d33a42 (US West)",
  "type": "awsebs"
}

Get the

...

awsS3Location for a

...

Clinical Dataset Layer

This returns the location data for a dataset layer.

...

Code Block
curl -i -H Accept:application/json 'http://localhost:8080/repo/v1/dataset/agxkZWZsYXV4LXRlc3RyFAsSDUdBRUpET0RhdGFzZXQYtAQMag1kZWZsYXV4LXRlc3QychQLEg1HQUVKRE9EYXRhc2V0GLQEDA/layer/agxkZWZsYXV4LXRlc3RyLwsSDUdBRUpET0RhdGFzZXQYtAQMCxIUR0FFSkRPSW5wdXREYXRhTGF5ZXIY5xEMag1kZWZsYXV4LXRlc3Qyci8LEg1HQUVKRE9EYXRhc2V0GLQEDAsSFEdBRUpET0lucHV0RGF0YUxheWVyGNMRDA/awsEBSLocationawsS3Location'

Response

Code Block
HTTP/1.1 200403 OKForbidden
Content-Type: application/json
Transfer-Encoding: chunked
Server: Jetty(6.1.x)

{
  "pathreason": "snap_29d33a42 (US West)",
  "type": "awsebs"
You are not authorized to access the requested resource and/or perform the requested activity"}

Get a

...

Expression Dataset Layer

This returns the metadata for a dataset layer.

...

Code Block
curl -i -H Accept:application/json 'http://localhost:8080/repo/v1/dataset/agxkZWZsYXV4LXRlc3RyFAsSDUdBRUpET0RhdGFzZXQYtAQMag1kZWZsYXV4LXRlc3QychQLEg1HQUVKRE9EYXRhc2V0GLQEDA/layer/agxkZWZsYXV4LXRlc3RyLwsSDUdBRUpET0RhdGFzZXQYtAQMCxIUR0FFSkRPSW5wdXREYXRhTGF5ZXIY0xEMag1kZWZsYXV4LXRlc3Qyci8LEg1HQUVKRE9EYXRhc2V0GLQEDAsSFEdBRUpET0lucHV0RGF0YUxheWVyGN0RDA'

Response

Code Block
HTTP/1.1 200 OK
Content-Type: application/json
ETag: -566282579306562719
Transfer-Encoding: chunked
Server: Jetty(6.1.x)

{
  "annotations": "/repo/v1/dataset/agxkZWZsYXV4LXRlc3RyFAsSDUdBRUpET0RhdGFzZXQYtAQMag1kZWZsYXV4LXRlc3QychQLEg1HQUVKRE9EYXRhc2V0GLQEDA/layer/agxkZWZsYXV4LXRlc3RyLwsSDUdBRUpET0RhdGFzZXQYtAQMCxIUR0FFSkRPSW5wdXREYXRhTGF5ZXIY0xEMag1kZWZsYXV4LXRlc3Qyci8LEg1HQUVKRE9EYXRhc2V0GLQEDAsSFEdBRUpET0lucHV0RGF0YUxheWVyGN0RDA/annotations",
  "creationDate": 12989454336331299001249454,
  "description": "",
  "etag": "-566282579306562719",
  "id": "agxkZWZsYXV4LXRlc3RyLwsSDUdBRUpET0RhdGFzZXQYtAQMCxIUR0FFSkRPSW5wdXREYXRhTGF5ZXIY0xEMag1kZWZsYXV4LXRlc3Qyci8LEg1HQUVKRE9EYXRhc2V0GLQEDAsSFEdBRUpET0lucHV0RGF0YUxheWVyGN0RDA",
  "locations": [
    "/repo/v1/dataset/agxkZWZsYXV4LXRlc3RyFAsSDUdBRUpET0RhdGFzZXQYtAQMag1kZWZsYXV4LXRlc3QychQLEg1HQUVKRE9EYXRhc2V0GLQEDA/layer/agxkZWZsYXV4LXRlc3RyLwsSDUdBRUpET0RhdGFzZXQYtAQMCxIUR0FFSkRPSW5wdXREYXRhTGF5ZXIY0xEMag1kZWZsYXV4LXRlc3Qyci8LEg1HQUVKRE9EYXRhc2V0GLQEDAsSFEdBRUpET0lucHV0RGF0YUxheWVyGN0RDA/awsEBSLocation",
    "/repo/v1/dataset/agxkZWZsYXV4LXRlc3RyFAsSDUdBRUpET0RhdGFzZXQYtAQMag1kZWZsYXV4LXRlc3QychQLEg1HQUVKRE9EYXRhc2V0GLQEDA/layer/agxkZWZsYXV4LXRlc3RyLwsSDUdBRUpET0RhdGFzZXQYtAQMCxIUR0FFSkRPSW5wdXREYXRhTGF5ZXIY0xEMag1kZWZsYXV4LXRlc3Qyci8LEg1HQUVKRE9EYXRhc2V0GLQEDAsSFEdBRUpET0lucHV0RGF0YUxheWVyGN0RDA/locations",
    "/repo/v1/dataset/agxkZWZsYXV4LXRlc3RyFAsSDUdBRUpET0RhdGFzZXQYtAQMag1kZWZsYXV4LXRlc3QychQLEg1HQUVKRE9EYXRhc2V0GLQEDA/layer/agxkZWZsYXV4LXRlc3RyLwsSDUdBRUpET0RhdGFzZXQYtAQMCxIUR0FFSkRPSW5wdXREYXRhTGF5ZXIY0xEMag1kZWZsYXV4LXRlc3Qyci8LEg1HQUVKRE9EYXRhc2V0GLQEDAsSFEdBRUpET0lucHV0RGF0YUxheWVyGN0RDA/awsS3LocationsageLocation",
    "/repo/v1/dataset/agxkZWZsYXV4LXRlc3RyFAsSDUdBRUpET0RhdGFzZXQYtAQMag1kZWZsYXV4LXRlc3QychQLEg1HQUVKRE9EYXRhc2V0GLQEDA/layer/agxkZWZsYXV4LXRlc3RyLwsSDUdBRUpET0RhdGFzZXQYtAQMCxIUR0FFSkRPSW5wdXREYXRhTGF5ZXIY0xEMag1kZWZsYXV4LXRlc3Qyci8LEg1HQUVKRE9EYXRhc2V0GLQEDAsSFEdBRUpET0lucHV0RGF0YUxheWVyGN0RDA/sageLocationawsS3Location"
  ],
  "name": "clinicalexpression data",
  "platform": null,
  "preview": "/repo/v1/dataset/agxkZWZsYXV4LXRlc3RyFAsSDUdBRUpET0RhdGFzZXQYtAQMag1kZWZsYXV4LXRlc3QychQLEg1HQUVKRE9EYXRhc2V0GLQEDA/layer/agxkZWZsYXV4LXRlc3RyLwsSDUdBRUpET0RhdGFzZXQYtAQMCxIUR0FFSkRPSW5wdXREYXRhTGF5ZXIY0xEMag1kZWZsYXV4LXRlc3Qyci8LEg1HQUVKRE9EYXRhc2V0GLQEDAsSFEdBRUpET0lucHV0RGF0YUxheWVyGN0RDA/preview",
  "processingFacility": null,
  "publicationDate": null,
  "qcBy": null,
  "qcDate": null,
  "releaseNotes": "",
  "tissueType": null,
  "type": "CE",
  "uri": "/repo/v1/dataset/agxkZWZsYXV4LXRlc3RyFAsSDUdBRUpET0RhdGFzZXQYtAQMag1kZWZsYXV4LXRlc3QychQLEg1HQUVKRE9EYXRhc2V0GLQEDA/layer/agxkZWZsYXV4LXRlc3RyLwsSDUdBRUpET0RhdGFzZXQYtAQMCxIUR0FFSkRPSW5wdXREYXRhTGF5ZXIY0xEMag1kZWZsYXV4LXRlc3Qyci8LEg1HQUVKRE9EYXRhc2V0GLQEDAsSFEdBRUpET0lucHV0RGF0YUxheWVyGN0RDA",
  "version": "0.0.1"
}

Get Annotations for a

...

Expression Dataset Layer

This returns the annotations for a dataset layer.

...

Code Block
curl -i -H Accept:application/json 'http://localhost:8080/repo/v1/dataset/agxkZWZsYXV4LXRlc3RyFAsSDUdBRUpET0RhdGFzZXQYtAQMag1kZWZsYXV4LXRlc3QychQLEg1HQUVKRE9EYXRhc2V0GLQEDA/layer/agxkZWZsYXV4LXRlc3RyLwsSDUdBRUpET0RhdGFzZXQYtAQMCxIUR0FFSkRPSW5wdXREYXRhTGF5ZXIY0xEMag1kZWZsYXV4LXRlc3Qyci8LEg1HQUVKRE9EYXRhc2V0GLQEDAsSFEdBRUpET0lucHV0RGF0YUxheWVyGN0RDA/annotations'

Response

Code Block
HTTP/1.1 200 OK
Content-Type: application/json
ETag: 923521
Transfer-Encoding: chunked
Server: Jetty(6.1.x)

{
  "creationDate": null,
  "dateAnnotations": {},
  "doubleAnnotations": {},
  "etag": "923521",
  "id": "agxkZWZsYXV4LXRlc3RyLwsSDUdBRUpET0RhdGFzZXQYtAQMCxIUR0FFSkRPSW5wdXREYXRhTGF5ZXIY0xEMag1kZWZsYXV4LXRlc3Qyci8LEg1HQUVKRE9EYXRhc2V0GLQEDAsSFEdBRUpET0lucHV0RGF0YUxheWVyGN0RDA",
  "longAnnotations": {},
  "stringAnnotations": {},
  "uri": "/repo/v1/dataset/agxkZWZsYXV4LXRlc3RyFAsSDUdBRUpET0RhdGFzZXQYtAQMag1kZWZsYXV4LXRlc3QychQLEg1HQUVKRE9EYXRhc2V0GLQEDA/layer/agxkZWZsYXV4LXRlc3RyLwsSDUdBRUpET0RhdGFzZXQYtAQMCxIUR0FFSkRPSW5wdXREYXRhTGF5ZXIY0xEMag1kZWZsYXV4LXRlc3Qyci8LEg1HQUVKRE9EYXRhc2V0GLQEDAsSFEdBRUpET0lucHV0RGF0YUxheWVyGN0RDA/annotations"
}

Get preview data for a

...

Expression Dataset Layer

This returns the preview data for a dataset layer.

...

Code Block
curl -i -H Accept:application/json 'http://localhost:8080/repo/v1/dataset/agxkZWZsYXV4LXRlc3RyFAsSDUdBRUpET0RhdGFzZXQYtAQMag1kZWZsYXV4LXRlc3QychQLEg1HQUVKRE9EYXRhc2V0GLQEDA/layer/agxkZWZsYXV4LXRlc3RyLwsSDUdBRUpET0RhdGFzZXQYtAQMCxIUR0FFSkRPSW5wdXREYXRhTGF5ZXIY0xEMag1kZWZsYXV4LXRlc3Qyci8LEg1HQUVKRE9EYXRhc2V0GLQEDAsSFEdBRUpET0lucHV0RGF0YUxheWVyGN0RDA/preview'

Response

Code Block
HTTP/1.1 200 OK
Content-Type: application/json
ETag: 345556318945969657
Transfer-Encoding: chunked
Server: Jetty(6.1.x)

{
  "etag": "345556318945969657",
  "id": "agxkZWZsYXV4LXRlc3RyLwsSDUdBRUpET0RhdGFzZXQYtAQMCxIUR0FFSkRPSW5wdXREYXRhTGF5ZXIY0xEMag1kZWZsYXV4LXRlc3Qyci8LEg1HQUVKRE9EYXRhc2V0GLQEDAsSFEdBRUpET0lucHV0RGF0YUxheWVyGN0RDA",
  "preview": "clinicalexpression data preview",
  "uri": "/repo/v1/dataset/agxkZWZsYXV4LXRlc3RyFAsSDUdBRUpET0RhdGFzZXQYtAQMag1kZWZsYXV4LXRlc3QychQLEg1HQUVKRE9EYXRhc2V0GLQEDA/layer/agxkZWZsYXV4LXRlc3RyLwsSDUdBRUpET0RhdGFzZXQYtAQMCxIUR0FFSkRPSW5wdXREYXRhTGF5ZXIY0xEMag1kZWZsYXV4LXRlc3Qyci8LEg1HQUVKRE9EYXRhc2V0GLQEDAsSFEdBRUpET0lucHV0RGF0YUxheWVyGN0RDA/preview"
}

Get the awsEBSLocation for a

...

Expression Dataset Layer

This returns the location data for a dataset layer.

...

Code Block
curl -i -H Accept:application/json 'http://localhost:8080/repo/v1/dataset/agxkZWZsYXV4LXRlc3RyFAsSDUdBRUpET0RhdGFzZXQYtAQMag1kZWZsYXV4LXRlc3QychQLEg1HQUVKRE9EYXRhc2V0GLQEDA/layer/agxkZWZsYXV4LXRlc3RyLwsSDUdBRUpET0RhdGFzZXQYtAQMCxIUR0FFSkRPSW5wdXREYXRhTGF5ZXIY0xEMag1kZWZsYXV4LXRlc3Qyci8LEg1HQUVKRE9EYXRhc2V0GLQEDAsSFEdBRUpET0lucHV0RGF0YUxheWVyGN0RDA/awsEBSLocation'

Response

Code Block
HTTP/1.1 200 OK
Content-Type: application/json
Transfer-Encoding: chunked
Server: Jetty(6.1.x)

{
  "path": "snap-29d33a42 (US West)",
  "type": "awsebs"
}

Get the

...

sageLocation for a

...

Expression Dataset Layer

This returns the location data for a dataset layer.

...

Code Block
curl -i -H Accept:application/json 'http://localhost:8080/repo/v1/dataset/agxkZWZsYXV4LXRlc3RyFAsSDUdBRUpET0RhdGFzZXQYtAQMag1kZWZsYXV4LXRlc3QychQLEg1HQUVKRE9EYXRhc2V0GLQEDA/layer/agxkZWZsYXV4LXRlc3RyLwsSDUdBRUpET0RhdGFzZXQYtAQMCxIUR0FFSkRPSW5wdXREYXRhTGF5ZXIY0xEMag1kZWZsYXV4LXRlc3Qyci8LEg1HQUVKRE9EYXRhc2V0GLQEDAsSFEdBRUpET0lucHV0RGF0YUxheWVyGN0RDA/awsS3LocationsageLocation'

Response

Code Block
HTTP/1.1 403200 ForbiddenOK
Content-Type: application/json
Transfer-Encoding: chunked
Server: Jetty(6.1.x)

{
  "reasonpath": "You are not authorized to access the requested resource and/or perform the requested activity"/Shares/external-data/DAT_030__human_liver_cohort",
  "type": "sage"
}

Get the

...

awsS3Location for a

...

Expression Dataset Layer

This returns the location data for a dataset layer.

...

Code Block
curl -i -H Accept:application/json 'http://localhost:8080/repo/v1/dataset/agxkZWZsYXV4LXRlc3RyFAsSDUdBRUpET0RhdGFzZXQYtAQMag1kZWZsYXV4LXRlc3QychQLEg1HQUVKRE9EYXRhc2V0GLQEDA/layer/agxkZWZsYXV4LXRlc3RyLwsSDUdBRUpET0RhdGFzZXQYtAQMCxIUR0FFSkRPSW5wdXREYXRhTGF5ZXIY0xEMag1kZWZsYXV4LXRlc3Qyci8LEg1HQUVKRE9EYXRhc2V0GLQEDAsSFEdBRUpET0lucHV0RGF0YUxheWVyGN0RDA/sageLocationawsS3Location'

Response

Code Block
HTTP/1.1 200403 OKForbidden
Content-Type: application/json
Transfer-Encoding: chunked
Server: Jetty(6.1.x)

{
  "pathreason": "/Shares/external-data/DAT_030__human_liver_cohort",
  "type": "sage"
You are not authorized to access the requested resource and/or perform the requested activity"}

REST API Schemas

Datasets List Schema

...

Code Block
HTTP/1.1 200 OK
Content-Type: application/json
Transfer-Encoding: chunked
Server: Jetty(6.1.x)

{
  "itemsoptional": {
 true,
  "optionalproperties": true,
    "type": "object"
  },{
  "optional": true,   "properties": {
    "paging": {
      "optional": true,
      "type": "object"
    },
    "results": {
      "items": {
        "items": {
          "optional": true,
 
        "type": "string"
        },
        "optional": true,
        "properties": {"class": {
          "optional": true,
          "type": "string"any"
         }},
  
     "type": "object"
      },
      "optional": true,
      "type": "array"
    },
    "totalNumberOfResults": {
      "optional": true,
      "type": "integer"
    }
  },
  "type": "object"
}

...

Code Block
curl -i -H Accept:application/json 'http://localhost:8080/repo/v1/dataset/agxkZWZsYXV4LXRlc3RyFAsSDUdBRUpET0RhdGFzZXQYtAQMag1kZWZsYXV4LXRlc3QychQLEg1HQUVKRE9EYXRhc2V0GLQEDA/schema'

Response

Code Block
HTTP/1.1 200 OK
Content-Type: application/json
Transfer-Encoding: chunked
Server: Jetty(6.1.x)

{
  "items": {
    "optional": true,
    "type":
"boolean"
  },
  "optional": true,
  "properties": {
    "annotations": {
      "optional": true,
      "type": "string"
    },
    "creationDate": {
      "optional": true,
      "type": "number"
    },
    "creator": {
      "optional": true,
      "type": "string"
    },
    "description": {
      "optional": true,
      "type": "string"
    },
    "etag": {
      "optional": true,
      "type": "string"
    },
    "hasClinicalData": {
      "optional": true,
      "type": "boolean"
    },
    "hasExpressionData": {
      "optional": true,
      "type": "boolean"
    },
    "hasGeneticData": {
      "optional": true,
      "type": "boolean"
    },
    "id": {
      "optional": true,
      "type": "string"
    },
    "layer": {
      "optional": true,
      "type": "string"
    },
    "name": {
      "optional": true,
      "type": "string"
    },
    "releaseDate": {
      "optional": true,
      "type": "number"
    },
    "status": {
      "optional": true,
      "type": "string"
    },
    "uri": {
      "optional": true,
      "type": "string"
    },
    "version": {
      "optional": true,
      "type": "string"
    }
  },
  "type": "object"
}

...

Code Block
curl -i -H Accept:application/json 'http://localhost:8080/repo/v1/dataset/agxkZWZsYXV4LXRlc3RyFAsSDUdBRUpET0RhdGFzZXQYtAQMag1kZWZsYXV4LXRlc3QychQLEg1HQUVKRE9EYXRhc2V0GLQEDA/annotations/schema'

Response

Code Block
HTTP/1.1 200 OK
Content-Type: application/json
Transfer-Encoding: chunked
Server: Jetty(6.1.x)

{
  "items": {
    "optional": true,
    "type": "string"
  }, 200 OK
Content-Type: application/json
Transfer-Encoding: chunked
Server: Jetty(6.1.x)

{
  "optional": true,
  "properties": {
    "creationDate": {
      "optional": true,
      "type": "number"
    },
    "dateAnnotations": {
      "optional": true,
      "type": "object"
    },
    "doubleAnnotations": {
      "optional": true,
      "type": "object"
    },
    "etag": {
      "optional": true,
      "type": "string"
    },
    "id": {
      "optional": true,
      "type": "string"
    },
    "longAnnotations": {
      "optional": true,
      "type": "object"
    },
    "stringAnnotations": {
      "optional": true,
      "type": "object"
    },
    "uri": {
      "optional": true,
      "type": "string"
    }
  },
  "type": "object"
}

...

Code Block
curl -i -H Accept:application/json 'http://localhost:8080/repo/v1/dataset/agxkZWZsYXV4LXRlc3RyFAsSDUdBRUpET0RhdGFzZXQYtAQMag1kZWZsYXV4LXRlc3QychQLEg1HQUVKRE9EYXRhc2V0GLQEDA/layer/schema'

Response

Code Block
HTTP/1.1 200 OK
Content-Type: application/json
Transfer-Encoding: chunked
Server: Jetty(6.1.x)

{
  "items": {
    "optional": true,
    "type": "object"
  },
  "optional": true,
  "properties": {
    "paging": {
      "optional": true,
      "type": "object"
    },
    "results": {
      "items": {
        "items": {
    200 OK
Content-Type: application/json
Transfer-Encoding: chunked
Server: Jetty(6.1.x)

{
  "optional": true,
  "properties": {
    "paging": {
      "optional": true,

         "type": "stringobject"
   
    },

       "optionalresults": true,
 {
      "properties": {"class"items": {
 
        "optional": true,
          "type": "string"
        }},
        "type": "object"any"
      },
      "optional": true,
      "type": "array"
    },
    "totalNumberOfResults": {
      "optional": true,
      "type": "integer"
    }
  },
  "type": "object"
}

...

Code Block
curl -i -H Accept:application/json 'http://localhost:8080/repo/v1/dataset/agxkZWZsYXV4LXRlc3RyFAsSDUdBRUpET0RhdGFzZXQYtAQMag1kZWZsYXV4LXRlc3QychQLEg1HQUVKRE9EYXRhc2V0GLQEDA/layer/agxkZWZsYXV4LXRlc3RyLwsSDUdBRUpET0RhdGFzZXQYtAQMCxIUR0FFSkRPSW5wdXREYXRhTGF5ZXIY0xEMag1kZWZsYXV4LXRlc3Qyci8LEg1HQUVKRE9EYXRhc2V0GLQEDAsSFEdBRUpET0lucHV0RGF0YUxheWVyGN0RDA/schema'

Response

Code Block
HTTP/1.1 200 OK
Content-Type: application/json
Transfer-Encoding: chunked
Server: Jetty(6.1.x)

{
  "items": {
    "optional": true,
    "type": "number"
  },.x)

{
  "optional": true,
  "properties": {
    "annotations": {
      "optional": true,
      "type": "string"
    },
    "creationDate": {
      "optional": true,
      "type": "number"
    },
    "description": {
      "optional": true,
      "type": "string"
    },
    "etag": {
      "optional": true,
      "type": "string"
    },
    "id": {
      "optional": true,
      "type": "string"
    },
    "locations": {
      "items": {
        "optional": true,
        "type": "string"
      },
      "optional": true,
      "type": "array"
    },
    "name": {
      "optional": true,
      "type": "string"
    },
    "platform": {
      "optional": true,
      "type": "string"
    },
    "preview": {
      "optional": true,
      "type": "string"
    },
    "processingFacility": {
      "optional": true,
      "type": "string"
    },
    "publicationDate": {
      "optional": true,
      "type": "number"
    },
    "qcBy": {
      "optional": true,
      "type": "string"
    },
    "qcDate": {
      "optional": true,
      "type": "number"
    },
    "releaseNotes": {
      "optional": true,
      "type": "string"
    },
    "tissueType": {
      "optional": true,
      "type": "string"
    },
    "type": {
      "optional": true,
      "type": "string"
    },
    "uri": {
      "optional": true,
      "type": "string"
    },
    "version": {
      "optional": true,
      "type": "string"
    }
  },
  "type": "object"
}

...

Code Block
curl -i -H Accept:application/json 'http://localhost:8080/repo/v1/dataset/agxkZWZsYXV4LXRlc3RyFAsSDUdBRUpET0RhdGFzZXQYtAQMag1kZWZsYXV4LXRlc3QychQLEg1HQUVKRE9EYXRhc2V0GLQEDA/layer/agxkZWZsYXV4LXRlc3RyLwsSDUdBRUpET0RhdGFzZXQYtAQMCxIUR0FFSkRPSW5wdXREYXRhTGF5ZXIY0xEMag1kZWZsYXV4LXRlc3Qyci8LEg1HQUVKRE9EYXRhc2V0GLQEDAsSFEdBRUpET0lucHV0RGF0YUxheWVyGN0RDA/preview/schema'

Response

Code Block
HTTP/1.1 200 OK
Content-Type: application/json
Transfer-Encoding: chunked
Server: Jetty(6.1.x)

{
  "items":
{
    "optional": true,
    "type": "string"
 
},   "optional": true,
  "properties": {
    "etag": {
      "optional": true,
      "type": "string"
    },
    "id": {
      "optional": true,
      "type": "string"
    },
    "preview": {
      "optional": true,
      "type": "string"
    },
    "uri": {
      "optional": true,
      "type": "string"
    }
  },
  "type": "object"
}

...

Code Block
curl -i -H Accept:application/json 'http://localhost:8080/repo/v1/dataset/agxkZWZsYXV4LXRlc3RyFAsSDUdBRUpET0RhdGFzZXQYtAQMag1kZWZsYXV4LXRlc3QychQLEg1HQUVKRE9EYXRhc2V0GLQEDA/layer/agxkZWZsYXV4LXRlc3RyLwsSDUdBRUpET0RhdGFzZXQYtAQMCxIUR0FFSkRPSW5wdXREYXRhTGF5ZXIY0xEMag1kZWZsYXV4LXRlc3Qyci8LEg1HQUVKRE9EYXRhc2V0GLQEDAsSFEdBRUpET0lucHV0RGF0YUxheWVyGN0RDA/locations/schema'

Response

Code Block
HTTP/1.1 200 OK
Content-Type: application/json
Transfer-Encoding: chunked
Server: Jetty(6.1.x)

{

 "items":
{
    "optional": true,
    "type": "string"
  },
  "optional": true,
  "properties": {
    "etag": {
      "optional": true,
      "type": "string"
    },
    "id": {
      "optional": true,
      "type": "string"
    },
    "locations": {
      "items": {
        "items": {
          "optional": true,": "string"
    },
     "typelocations": "string"{
      "items": {
},         "optional": true,
        "properties": {
          "path": {
            "optional": true,
            "type": "string"
          },
          "type": {
            "optional": true,
            "type": "string"
          }
        },
        "type": "object"
      },
      "optional": true,
      "type": "array"
    },
    "uri": {
      "optional": true,
      "type": "string"
    }
  },
  "type": "object"
}

...

Code Block
curl -i -H Accept:application/json 'http://localhost:8080/repo/v1/dataset/agxkZWZsYXV4LXRlc3RyFAsSDUdBRUpET0RhdGFzZXQYtAQMag1kZWZsYXV4LXRlc3QychQLEg1HQUVKRE9EYXRhc2V0GLQEDA/layer/agxkZWZsYXV4LXRlc3RyLwsSDUdBRUpET0RhdGFzZXQYtAQMCxIUR0FFSkRPSW5wdXREYXRhTGF5ZXIY0xEMag1kZWZsYXV4LXRlc3Qyci8LEg1HQUVKRE9EYXRhc2V0GLQEDAsSFEdBRUpET0lucHV0RGF0YUxheWVyGN0RDA/awsEBSLocation/schema'

Response

Code Block
HTTP/1.1 200 OK
Content-Type: application/json
Transfer-Encoding: chunked
Server: Jetty(6.1.x)

{

 "items":
{
    "optional": true,
    "type": "string"
  },
  "optional": true,
  "properties": {
    "path": {
      "optional": true,
      "type": "string"
    },
    "type": {
      "optional": true,
      "type": "string"
    }
  },
  "type": "object"
}

Get the

...

sageLocation for a Dataset Layer

The JsonSchema is an emerging standard similar to DTDs for XML.

...

Code Block
curl -i -H Accept:application/json 'http://localhost:8080/repo/v1/dataset/agxkZWZsYXV4LXRlc3RyFAsSDUdBRUpET0RhdGFzZXQYtAQMag1kZWZsYXV4LXRlc3QychQLEg1HQUVKRE9EYXRhc2V0GLQEDA/layer/agxkZWZsYXV4LXRlc3RyLwsSDUdBRUpET0RhdGFzZXQYtAQMCxIUR0FFSkRPSW5wdXREYXRhTGF5ZXIY0xEMag1kZWZsYXV4LXRlc3Qyci8LEg1HQUVKRE9EYXRhc2V0GLQEDAsSFEdBRUpET0lucHV0RGF0YUxheWVyGN0RDA/awsS3LocationsageLocation/schema'

Response

Code Block
HTTP/1.1 200 OK
Content-Type: application/json
Transfer-Encoding: chunked
Server: Jetty(6.1.x)

{
  "items":
{
    "optional": true,
    "type": "string"
 
},   "optional": true,
  "properties": {
    "path": {
      "optional": true,
      "type": "string"
    },
    "type": {
      "optional": true,
      "type": "string"
    }
  },
  "type": "object"
}

Get the

...

awsS3Location for a Dataset Layer

The JsonSchema is an emerging standard similar to DTDs for XML.

...

Code Block
curl -i -H Accept:application/json 'http://localhost:8080/repo/v1/dataset/agxkZWZsYXV4LXRlc3RyFAsSDUdBRUpET0RhdGFzZXQYtAQMag1kZWZsYXV4LXRlc3QychQLEg1HQUVKRE9EYXRhc2V0GLQEDA/layer/agxkZWZsYXV4LXRlc3RyLwsSDUdBRUpET0RhdGFzZXQYtAQMCxIUR0FFSkRPSW5wdXREYXRhTGF5ZXIY0xEMag1kZWZsYXV4LXRlc3Qyci8LEg1HQUVKRE9EYXRhc2V0GLQEDAsSFEdBRUpET0lucHV0RGF0YUxheWVyGN0RDA/sageLocationawsS3Location/schema'

Response

Code Block
HTTP/1.1 200 OK
Content-Type: application/json
Transfer-Encoding: chunked
Server: Jetty(6.1.x)

{
 
"items":
{
    "optional": true,
    "type": "string"
  },
  "optional": true,
  "properties": {
    "path": {
      "optional": true,
      "type": "string"
    },
    "type": {
      "optional": true,
      "type": "string"
    }
  },
  "type": "object"
}

...