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NOTE: The Evaluation services were initially introduced as the Competition services

Overview

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Synapse Evaluations are constructed around three primary objects: Evaluation , Participant, and Submission. These objects are defined by eponymous JSON schema files in the Synapse Repository Services. Image RemovedThe UMLet file used to generate the following image is available here.

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Evaluation
Object representing a Synapse Evaluation

ID - unique ID for the Evaluation
eTag - optimistic concurrency flag; changes with each update
ownerID - principal ID of the owner of the Evaluation
name
description
contentSource - ID of the data source (e.g. entity) for the Evaluation (string)
status - enum describing the state of the Evaluation, one of: PLANNED, OPEN, CLOSED, COMPLETED

...

ownerID - principal ID of the Participant
evaluationID
createdOn - join date

Submission
Immutable object to represent an entity submission to a Evaluation. A participant can create many Submissions for a given Evaluation.

ID - unique ID for the Submission
name
ownerID - principal ID of the Submission owner
evaluationID
entityID - ID of the submitted entity
version - specific entity version
createdOn - submission date
submitterAlias - the alias for the user or team creating the submission

SubmissionStatus
Object to track the status and score of a specific Submission. This object is generated at the time of submission, and can be modified by Evaluation administrators.

submissionID
eTag - optimistic concurrency flag; changes with each update
status - enum describing the state of the Submission, one of: OPEN, CLOSED, SCORED, INVALID
score - numerical score for this Submission (double between 0 and 1)
report - String describing this Submission and/or its scoring. May contain additional scoring information, error logs, etc.
annotations - Annotations object containing user-defined key-value annotations. Note: The contents of the annotations are mirrored to a second set of tables optimized for querying, as discussed here.

SubmissionBundle
Bundle object containing a Submission and its accompanying SubmissionStatus.

SubmissionStatusBatch

Used to upload a collection of Submission updates at once.

REST API

Evaluation

URL	HTTP Type	Description
/evaluation	POST	Create a new Evaluation
/evaluation/{evaluationId}	GET	Get a Evaluation
/evaluation/{evaluationId}	PUT	Update a Evaluation
/evaluation/{evaluationId}	DELETE	Delete a Evaluation
/evaluation	GET	Batch Get Evaluations (Paginated) Optional request parameters: limit (long), offset (long)
/evaluation/count	GET	Get the number of Evaluations
/evaluation/name/{name}	GET	Find a Evaluation by name Note that the name must be URL-encoded

Participant

HTTP Type{evaluationId}/participant

URL		Description
/evaluation/	POST	Join as a Participant in a Evaluation *
/evaluation/{evaluationId}/participant/{principalId}	POST	Add another user as a Participant in a Evaluation. * Requires admin rights on the Evaluation.
/evaluation/{evaluationId}/participant/{principalId}	GET	Get a Participant
/evaluation/{evaluationId}/participant/{principalId}	DELETE	Delete a Participant
/evaluation/{evaluationId}/participant/	GET	Batch get Participants for a given Evaluation(Paginated)available	GET	Get the paginated list of Evaluations which the user has joined as a participant. Optional request parameters: limit (long), offset (long)
/evaluation/{evaluationId}/participant/count	GET	Get the number of Participants in a given Evaluation

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, status (OPEN,CLOSED,...)

Submission

URL	HTTP Type	Description
/evaluation/submission?etag=<etag>	POST	Create a new Submission (and corresponding SubmissionStatus object). Requires the current etag of the Entity in the Submission. Required request parameter: etag (string)
/evaluation/submission/{submissionId}	GET	Get a Submission Requires ownership of the Submission, or admin rights on the Evaluation.
/evaluation/submission/{submissionId}/status	GET	Get the status of a Submission
/evaluation/submission/{submissionId}/status	PUT	Update the status of a Submission. Requires admin rights on the Evaluation
/evaluation/submission/{submissionId}	DELETE	Delete a Submission. Requires admin rights on the Evaluation.
/evaluation/{evaluationId}/submission/ /evaluation/{evaluationId}/submission/bundle/	GET	Batch get my Submissions/SubmissionBundles for a given Evaluation. Results are paginated. Returns only Submissions owned by the requesting user. Optional request parameters: limit (long), offset (long)
/evaluation/{evaluationId}/submission/all /evaluation/{evaluationId}/submission/status/all /evaluation/{evaluationId}/submission/bundle/all	GET	Batch get Submissions/SubmissionStatuses/SubmissionBundles for a given Evaluation. Results are paginated. Requires admin rights on the Evaluation. Can be filtered by SubmissionStatusEnum. Optional request parameters: status (String), limit (long), offset (long)
/evaluation/submission/{submissionId}/file/{fileHandleId}	GET	Get a temporary pre-signed URL to a File contained within a specified Submission. Requires admin rights on the Evaluation. Optional request parameter: redirect (Boolean)
/evaluation/{evaluationId}/submission/count	GET	Get the number of Submissions for a given Evaluation.

Access Restrictions

Access Restrictions and approvals may be applied to Evaluations. For details on the API see: Data Access Control

cURL Examples

Evaluation

Create an Evaluation

Code Block

curl -i -k -H sessionToken:xxxxxxxxxxxxxxxx -H Accept:application/json -H Content-Type:application/json -d '{
    "status":"PLANNED",
    "description":"description",
    "name":"my first evaluation",
    "contentSource":"contentSource"
}' https://repo-staging.prod.sagebase.org/repo/v1/evaluation

Get an Evaluation

Code Block
curl -i -k -H sessionToken:xxxxxxxxxxxxxxxx -H Accept:application/json 'https://repo-staging.prod.sagebase.org/repo/v1/evaluation/1588317'

Update an Evaluation

Code Block

curl -i -k -H sessionToken:xxxxxxxxxxxxxxxx -H Accept:application/json -H Content-Type:application/json -X PUT -d '{
    "id":"1588317",
    "createdOn":"2013-01-16T16:30:56.727Z",
    "etag":"eed22bca-d88e-4b4a-8b1a-35dca7b7b8db",
    "status":"OPEN",
    "description":"description",
    "ownerId":"1588313",
    "name":"my first evaluation",
    "contentSource":"contentSource"
}' https://repo-staging.prod.sagebase.org/repo/v1/evaluation/1588317

Delete an Evaluation

Code Block
curl -i -k -H sessionToken:okxkSRyl3v0iIf0eutQfXA00 -H Accept:application/json -X DELETE 'https://repo-staging.prod.sagebase.org/repo/v1/evaluation/1588317'

Participant

Create a Participant

Code Block

curl -i -k -H sessionToken:xxxxxxxxxxxxxxxx -H Accept:application/json -H Content-Type:application/json -d '{
    "ownerId":"123456"
}' https://repo-staging.prod.sagebase.org/repo/v1/evaluation/987654/participant

...

Delete a Participant

Code Block
curl -i -k -H sessionToken:xxxxxxxxxxxxxxxx -H Accept:application/json -X DELETE 'https://repo-staging.prod.sagebase.org/repo/v1/evaluation/1588317/participant/1588313'

Submission

Create a Submission

Code Block

curl -i -k -H sessionToken:xxxxxxxxxxxxxxxx -H Accept:application/json -H Content-Type:application/json -d '{
    "evaluationId":"1588317",
    "entityId":"1588315",
    "versionNumber":"1",
    "name":"some-name"
}' https://repo-staging.prod.sagebase.org/repo/v1/evaluation/submission

Update a SubmissionStatus

Code Block

curl -i -k -H sessionToken:xxxxxxxxxxxxxxxx -H Accept:application/json -H Content-Type:application/json -X PUT -d '{
    "id":"1589914",
    "modifiedOn":"2013-01-18T21:43:18.897Z",
    "etag":"13c88b1a-662c-4dd6-bb56-3976566516f7",
    "status":"SCORED",
    "score":0.42
}' https://repo-staging.prod.sagebase.org/repo/v1/evaluation/submission/1589914/status

Delete a Submission

Code Block
curl -i -k -H sessionToken:dPF2TqGUq121PR36AwJhXw00 -H Accept:application/json -X DELETE 'https://repo-staging.prod.sagebase.org/repo/v1/evaluation/submission/1589912'

...

Banned user lists
Banned users should be prohibited from participating in one or more Evaluations, and any Submissions by a banned user should be isolated from the general populations of Submissions.
Jira Legacy
server JIRA (sagebionetworks.jira.com)
serverId ba6fb084-9827-3160-8067-8ac7470f78b2
key PLFM-1646
Customizable Amazon Simple Notification Services messaging tools
Evaluation administrators should have tools to configure a selective Amazon instance to listen for messages pertaining to Evaluations which they own. These messages should be sent to a queue dedicated to Evaluations.
Jira Legacy
server JIRA (sagebionetworks.jira.com)
serverId ba6fb084-9827-3160-8067-8ac7470f78b2
key PLFM-1647
Immutable copies of submitted Entities
Once an Entity is submitted to a Evaluation, a static copy of that Entity should become the property of the Evaluation administration.
Jira Legacy
server JIRA (sagebionetworks.jira.com)
serverId ba6fb084-9827-3160-8067-8ac7470f78b2
key PLFM-1648
pAdministrator Administrator lists for Evaluations
Evaluations should support administration by multiple users (rather than just the Evaluation owner). These admin lists should function as a lightweight ACL of sorts.
Jira Legacy
server JIRA (sagebionetworks.jira.com)
serverId ba6fb084-9827-3160-8067-8ac7470f78b2
key PLFM-1649

Versions Compared

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Table of Contents

Overview

REST API

Access Restrictions

cURL Examples

Evaluation

Participant

Submission