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Last updated on 2023-09-15

This page is intended to describe describes the workflow required to build, edit, and update the data model for MODEL-AD.

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Guide to Developing Data Models in JSON-LD

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https://github.com/adknowledgeportal/data-models

https://sagebionetworks.jira.com/wiki/spaces/SCHEM/pages/2458648589/Setting+up+a+DCC+Asset+Store#How-do-I-Structure-My-DCC-Synapse-Project-to-Work-with-the-Data-Curator-App%3F

Projects

Folder Structure

https://dca-docs.scrollhelp.site/DCA/Working-version/Project-Agnostic/organize-your-data-upload#OrganizeyourDataUpload-FlattenedDataLayoutExample

Code Block
.
├── biospecimen_experiment_1
    ├── manifest1.csv
├── biospecimen_experiment_2
    ├── manifestA.csv
├── single_cell_RNAseq_batch_1
    ├── manifestX.csv
    ├── fileA.txt
    ├── fileB.txt
    ├── fileC.txt
    └── fileD.txt
└── single_cell_RNAseq_batch_2
    ├── manifestY.csv
    └── file1.txt

Study Content

/wiki/spaces/AKP/pages/1057882353

  • Study Description in wiki

  • Methods description in each data folder

/wiki/spaces/EPD1/pages/2900819969

AMP-AD

https://github.com/adknowledgeportal/test-data-model/blob/main/model-ad/model-ad.data.model.jsonld

https://github.com/adknowledgeportal/data-models/blob/main/README.md#editing-data-models

AD data model → modular

repo:

branch: test-split-csvs

folders:

modules/

..biosopecimen/

..mouse/

Jira Legacy
serverSystem JIRA
serverIdba6fb084-9827-3160-8067-8ac7470f78b2
keyADM-836

Term = Attribute in the data model where Parent = DataProperty

test-split0csvs branch

MODEL-AD

ELITE

Annotate study folder with contentType = 'dataset'

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