Page Comparison

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	Power	p-value	Adj R^2	Truncated Adj R^2	slope	mean(k)	median(k)	max(k)		Power	SFT.R.sq	slope	truncated.R.sq	mean.k.	median.k.	max.k.
1	1	-1	0.707	0.991	1.18	700	700	1120	1	1	0.737	1.14	0.994	700	700	1120
2	1.5	-1	0.231	0.969	0.332	440	424	840	2	1.5	0.252	0.298	0.979	440	424	840
3	2	-1	0.0114	0.903	-0.136	296	269	668	3	2	0.12	-0.164	0.917	296	269	668
4	2.5	-1	0.523	0.921	-0.444	209	178	549	4	2.5	0.623	-0.491	0.901	209	178	549
5	3	-1	0.749	0.914	-0.66	153	120	463	5	3	0.788	-0.683	0.904	153	120	463
6	3.5	-1	0.819	0.892	-0.798	115	83.7	399	6	3.5	0.863	-0.857	0.889	115	83.7	399
7	4	-1	0.864	0.892	-0.918	89.5	59.4	351	7	4	0.895	-0.952	0.894	89.5	59.4	351
8	4.5	-1	0.884	0.888	-1.01	70.9	42.2	313	8	4.5	0.906	-1.04	0.887	70.9	42.2	313
9	5	-1	0.879	0.872	-1.08	57.3	30.5	283	9	5	0.917	-1.09	0.894	57.3	30.5	283
10	5.5	-1	0.887	0.878	-1.12	47.1	22.6	258	10	5.5	0.903	-1.13	0.876	47.1	22.6	258
11	6	-1	0.872	0.864	-1.14	39.3	16.8	237	11	6	0.894	-1.14	0.872	39.3	16.8	237
12	6.5	-1	0.853	0.849	-1.16	33.2	12.5	220	12	6.5	0.877	-1.17	0.861	33.2	12.5	220
13	7	-1	0.849	0.857	-1.16	28.5	9.75	205	13	7	0.868	-1.17	0.863	28.5	9.75	205
14	7.5	-1	0.836	0.861	-1.16	24.7	7.44	193	14	7.5	0.869	-1.16	0.888	24.7	7.44	193
15	8	-1	0.831	0.873	-1.15	21.6	5.73	182	15	8	0.86	-1.15	0.89	21.6	5.73	182
16	8.5	-1	0.807	0.87	-1.15	19.1	4.43	172	16	8.5	0.84	-1.15	0.89	19.1	4.43	172
17	9	-1	0.78	0.858	-1.14	17	3.49	164	17	9	0.828	-1.13	0.896	17	3.49	164
18	9.5	-1	0.792	0.889	-1.11	15.3	2.75	156	18	9.5	0.825	-1.1	0.912	15.3	2.75	156
19	10	-1	0.782	0.906	-1.09	13.9	2.18	149	19	10	0.806	-1.09	0.915	13.9	2.18	149
20	10.5	-1	0.759	0.897	-1.07	12.7	1.74	143	20	10.5	0.8	-1.08	0.921	12.7	1.74	143
21	11	-1	0.747	0.902	-1.06	11.6	1.4	138	21	11	0.789	-1.06	0.933	11.6	1.4	138
22	11.5	-1	0.752	0.914	-1.04	10.7	1.14	133	22	11.5	0.779	-1.04	0.935	10.7	1.14	133
23	12	-1	0.743	0.924	-1.01	9.91	0.926	128	23	12	0.779	-1.02	0.947	9.91	0.926	128

...

Cut	p-value	Adj R^2	Truncated Adj R^2	slope	mean(k)	median(k)	max(k)	Power	SFT.R.sq	slope	truncated.R.sq	mean.k.	median.k.	max.k.
1	-1	0.0227	0.628	0.245	1120	1080	2090	1	0.076261431	0.197158442	0.578527312	1124.638974	1080.609612	2089.60932
1.5	-1	0.303	0.63	-0.361	664	583	1560	1.5	0.48169911	-0.404715749	0.667548985	664.3731336	582.9224274	1556.715216
2	-1	0.693	0.795	-0.657	427	330	1220	2	0.804272633	-0.671388746	0.848889263	426.8848938	329.8816149	1215.968849
2.5	-1	0.794	0.851	-0.821	292	195	988	2.5	0.83774129	-0.824722962	0.860045069	291.5785624	194.5178802	987.8658261
3	-1	0.803	0.858	-0.921	209	121	822	3	0.835678099	-0.929654091	0.857157416	208.5830425	120.747754	822.3388256
3.5	-1	0.778	0.843	-1.01	155	77.7	697	3.5	0.854303701	-0.991173832	0.88464139	154.6909499	77.68335319	697.1742337
4	-1	0.797	0.86	-1.06	118	50.4	600	4	0.858882119	-1.038499794	0.896861118	118.0810366	50.39027229	599.5206128
4.5	-1	0.805	0.875	-1.1	92.3	33.2	521	4.5	0.838656539	-1.088724946	0.885484443	92.28466832	33.16210354	521.4428092
5	-1	0.806	0.881	-1.14	73.6	22.7	458	5	0.825292656	-1.128907991	0.87822147	73.55040348	22.67682493	457.77922
5.5	-1	0.796	0.881	-1.17	59.6	15.6	405	5.5	0.83215391	-1.150386899	0.897853335	59.59567098	15.64824143	405.0274823
6	-1	0.804	0.895	-1.2	49	11.1	361	6	0.845996532	-1.170462192	0.912613381	48.974624	11.08447179	360.7272536
6.5	-1	0.802	0.902	-1.22	40.7	8.15	323	6.5	0.847401052	-1.190785046	0.919920844	40.73957671	8.15415001	323.099656
7	-1	0.82	0.916	-1.23	34.3	6	291	7	0.852903615	-1.206125559	0.930763629	34.25083811	6.002829394	290.8269204
7.5	-1	0.824	0.925	-1.25	29.1	4.56	263	7.5	0.853122377	-1.223895553	0.937931424	29.06544208	4.562225559	262.9124211
8	-1	0.828	0.933	-1.26	24.9	3.46	239	8	0.852375009	-1.242759963	0.940436732	24.8696934	3.456350492	238.5887885
8.5	-1	0.837	0.943	-1.28	21.4	2.68	217	8.5	0.864808	-1.252939098	0.94865967	21.43698937	2.680344008	217.2558463
9	-1	0.845	0.948	-1.29	18.6	2.14	198	9	0.868297799	-1.270639687	0.954031038	18.60071642	2.140872759	198.437645
9.5	-1	0.844	0.948	-1.31	16.2	1.79	182	9.5	0.865440466	-1.29104469	0.95381823	16.2364064	1.79054592	181.7520694
10	-1	0.845	0.952	-1.33	14.2	1.55	167	10	0.867269282	-1.305137195	0.956043538	14.24973176	1.546465871	166.888929
10.5	-1	0.828	0.937	-1.36	12.6	1.34	154	10.5	0.844737719	-1.338309611	0.935054066	12.5682699	1.342608295	153.5938942
11	-1	0.839	0.945	-1.37	11.1	1.15	142	11	0.852293764	-1.338837015	0.942845287	11.13575271	1.153365724	141.6565405
11.5	-1	0.798	0.908	-1.41	9.91	1.02	131	11.5	0.822451916	-1.370539998	0.915807049	9.907986177	1.023113579	130.9013282
12	-1	0.805	0.911	-1.42	8.85	0.917	121	12	0.831943361	-1.384756316	0.921983468	8.849912231	0.91731928	121.1807115

...

Cut	p-value	Adj R^2	Truncated Adj R^2	slope	mean(k)	median(k)	max(k)
1	-1	0.12	0.871	0.841	949	939	1640
1.5	-1	-0.0707	0.854	-0.11	508	486	1110
2	-1	0.164	0.895	-0.688	294	268	787
2.5	-1	0.41	0.939	-1.03	181	156	583
3	-1	0.554	0.953	-1.28	117	94.7	445
3.5	-1	0.656	0.966	-1.47	79	59.7	347
4	-1	0.713	0.973	-1.58	54.9	38.4	276
4.5	-1	0.76	0.981	-1.67	39.3	25.3	223
5	-1	0.786	0.983	-1.72	28.8	17	182
5.5	-1	0.801	0.983	-1.75	21.5	11.7	150
6	-1	0.821	0.987	-1.78	16.4	8.33	125
6.5	-1	0.825	0.979	-1.79	12.7	6.04	104
7	-1	0.824	0.969	-1.8	10	4.5	88.1
7.5	-1	0.83	0.971	-1.8	8.03	3.35	74.8
8	-1	0.835	0.977	-1.79	6.52	2.54	63.9
8.5	-1	0.843	0.983	-1.77	5.36	1.93	54.8
9	-1	0.849	0.984	-1.74	4.45	1.53	47.2
9.5	-1	0.845	0.975	-1.72	3.75	1.22	40.9
10	-1	0.859	0.976	-1.66	3.19	0.994	35.5
10.5	-1	0.873	0.973	-1.61	2.74	0.835	31
11	-1	0.904	0.98	-1.53	2.38	0.694	27.1
11.5	-1	0.907	0.983	-1.53	2.08	0.564	24.7
12	-1	0.877	0.963	-1.58	1.84	0.462	23.4

...

Unequal beta, module diff=4.7%

identical beta, module diff=? 0.6%

grey turquoise brown blue yellow red green black magenta purple greenyellow pink
grey        16718         4     0    1      4   1     6     8       1      1           0   17
blue           47       226     0    0      0   0     0     0       0      0           0    0
brown          16         0   194    0      0   0     0     0       0      0           0    0
turquoise      80         0     0 185      0   0     3    51       0      0           0    0
yellow         25         0     0    0    114   0     0     0       0      0           0    0
green          26         0     0    5      0 102     0     0       0      0           0    0
red            19         0     0    2      0   0   100     0       0      0           0    0
pink           68         0     0    0      0   0     0     0       0      0           0    0
magenta        11         0     0    0      0   0     0     0      45      0           0    0
black          45        22     0    4      0   0     0    44       0      0           0    0
purple          6         0     0    0      0   0     0     0       0     43           0    0
salmon         36         0     0    0      0   0     0     0       0      0           0    0
greenyellow     6         0     0    0      0   0     0     0       0      0          36    0
tan             2         0     0    0      0   0     0     0       0      0           0   35
cyan           32         0     0    0      0   0     0     0       0      0           0    0

grey turquoise blue brown yellow green black red pink magenta purple greenyellow
grey      17091         3    0     0      0     0     2   2    0       0      1           0
blue         13       247    0     0      0     0     2   0    0       0      0           0
turquoise    21         2 197     0      0   109    99   3    0       0      0           0
brown         0         0    0   194      0     0     0   0    0       0      0           0
yellow        0         0    0     0    118     0     0   0    0       0      0           0
green         3         0    0     0      0     0     0 98    0       0      0           0
black         0         0    0     0      0     0     0   0   52       0      0           0
red           9         0    0     0      0     0     0   0    0      46      0           0
pink          0         0    0     0      0     0     0   0    0       0     43           0
magenta       0         0    0     0      0     0     0   0    0       0      0          36

Methylation (full set)

Soft Threshold Choice

Cut	p-value	Adj R^2	Truncated Adj R^2	slope	mean(k)	median(k)	max(k)	Power	SFT.R.sq	slope	truncated.R.sq	mean.k.	median.k.	max.k.
1	-1	-0.00512	-0.0562	0.247	2120	2230	3640	1	0.039759972	0.169460948	-0.042121587	7249.755797	7583.706845	12508.45604
1.5	-1	0.0167	0.413	-0.215	1410	1350	2880	1.5	0.140389955	-0.269553255	0.59303507	4828.992487	4542.145536	10029.03836
2	-1	0.184	0.688	-0.366	1020	845	2400	2	0.276562808	-0.390168503	0.631322022	3491.738926	2824.215768	8386.544599
2.5	-1	0.257	0.645	-0.414	778	541	2040	2.5	0.362446542	-0.458433391	0.523661313	2655.348672	1808.299631	7173.887246
3	-1	0.323	0.563	-0.453	611	356	1760	3	0.42871745	-0.515750913	0.431061197	2086.334341	1176.893287	6223.960796
3.5	-1	0.386	0.51	-0.49	491	238	1540	3.5	0.46604534	-0.560354757	0.369873339	1676.348853	781.2514422	5452.12826
4	-1	0.451	0.509	-0.516	401	160	1350	4	0.493523645	-0.60630005	0.358279952	1368.885142	527.8374153	4809.805129
4.5	-1	0.504	0.513	-0.545	331	112	1190	4.5	0.51122219	-0.643452727	0.371756376	1131.587843	368.4541959	4266.321824
5	-1	0.542	0.521	-0.577	276	81	1050	5	0.522934331	-0.681405777	0.399981701	944.5030783	259.4558865	3800.880221
5.5	-1	0.571	0.536	-0.608	232	57.9	939	5.5	0.532765178	-0.72250099	0.440336737	794.5816675	186.1875426	3398.594443
6	-1	0.588	0.556	-0.636	196	42.3	838	6	0.543038666	-0.754901305	0.481364519	672.8857753	135.1591844	3048.3654
6.5	-1	0.612	0.591	-0.664	167	30.8	750	6.5	0.546592526	-0.787367292	0.521630192	573.065346	99.6082135	2741.653967
7	-1	0.635	0.628	-0.688	143	23	673	7	0.546688103	-0.824100826	0.556997344	490.4753338	72.92787987	2471.728523
7.5	-1	0.634	0.646	-0.724	123	17.1	606	7.5	0.540586249	-0.867631489	0.58655908	421.6371568	54.2456294	2233.179306
8	-1	0.652	0.682	-0.744	106	12.7	547	8	0.548418618	-0.896985225	0.619099353	363.8954176	40.26400042	2021.591247
8.5	-1	0.646	0.691	-0.776	91.5	9.69	494	8.5	0.564768173	-0.919427493	0.659981637	315.1907849	30.24453177	1833.315466
9	-1	0.65	0.714	-0.803	79.5	7.35	448	9	0.571866178	-0.945524396	0.689291949	273.9048972	22.6602808	1665.30474
9.5	-1	0.633	0.716	-0.84	69.2	5.47	406	9.5	0.573099177	-0.977455448	0.712350288	238.7515604	17.41343565	1514.991934
10	-1	0.625	0.727	-0.867	60.5	4.25	369	10	0.578839688	-1.000683008	0.734565322	208.6986492	13.25463367	1380.198191
10.5	-1	0.626	0.742	-0.893	53	3.29	336	10.5	0.588455603	-1.026903911	0.755386914	182.9109323	10.10196054	1259.062284
11	-1	0.643	0.769	-0.905	46.5	2.61	306	11	0.597054452	-1.052133963	0.775670911	160.707503	7.788443435	1149.985372
11.5	-1	0.657	0.79	-0.926	40.9	2.05	279	11.5	0.608963051	-1.071230234	0.793960474	141.5296132	6.067481982	1051.587206
12	-1	0.669	0.809	-0.941	36.1	1.57	255	12	0.605496603	-1.104019616	0.800156429	124.9160557	4.734398295	962.6709874

...

Unequal beta, module diff=14%

Identical beta, module diff=0.2%

turquoise grey blue brown yellow green red pink magenta black purple
turquoise     13693    0    0     1     14     0   0    0       0     0      0
grey           1302 8623 757   459    304   116 106   11      40    39     32
blue             42    2 1139     1      2     0   0    0       0     0      0
brown             1    0    0     0      0   277   0    0       0     0      0
green           180    2    0     0      3     0   0    0       0     0      0
yellow           45    0    0    73    100     0   0    0       0     0      0
red              28    0    0    85      3     0   0    0       0     0      0
black             8    0    0     0      0     0   0   51       0     0      0
pink              0    0    0     0      0     0   0    0       0    39      0

   turquoise grey blue brown yellow green red black pink magenta purple
turquoise       15263    0    0     0     17     0   0     0    0       0      0
grey                1 8619    2     4      0     0   0     0    0       0      1
blue                0    0 1894     1      1     0   0     0    0       0      0
brown               1    6    0   532      4     0   0     0    0       0      0
yellow             34    1    0     2    404     0   0     0    0       0      0
green               0    0    0     0      0   393   0     0    0       0      0
red                 0    1    0     0      0     0 106     0    0       0      0
black               0    0    0    80      0     0   0     0    0       0      0
pink                0    0    0     0      0     0   0    78    0       0      0
magenta             0    0    0     0      0     0   0     0   62       0      0
purple              0    0    0     0      0     0   0     0    0      40      0
greenyellow         0    0    0     0      0     0   0     0    0       0     31

Versions Compared

Old Version 19

New Version Current

Key

Methylation (full set)

Soft Threshold Choice