Meeting objectives:
- What data can we access?
- How do we access it?
- What formats is it in?
- How is data organized including meta-data sample annotations, and how we can interact with it.
- Is it possible to drill down to something akin to a schema description of how the data are organized and begin exploring the database?
Notes on available sequencing data
TCGA samples sequenced: 11/1/2011
There are 4883 sequencing files, but an individual may have multiple data types (exome, genome, miRNA, or RNAseq), and occasionally more than one sequence file/data type. There are 1610 subjects that have at least one type of data. I have attached the complete file where it also shows cancer type
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