R version 2.13.0 64 bit, SageBionetworksCoex 0.11, running time ~4.5 hours (~27k by 486)
beta=6, R=0.89. Number of modules: 18 + 1 (grey):
Module | # of probes | Module | # of probes |
---|---|---|---|
black | 108 | pink | 97 |
blue | 1206 | purple | 89 |
brown | 615 | red | 113 |
cyan | 43 | salmon | 46 |
greenyellow | 86 | tan | 85 |
grey | 22115 | turquoise | 2151 |
grey60 | 33 | yellow | 469 |
lightcyan | 34 | lightgreen | 32 |
magenta | 92 | green | 121 |
midnightblue | 43 |
|
|
Analysis of the first PC of each module: