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Intramodular statistics are faster, with identical results.
Diagnostic plot set is reduced from 12 to 86, omitting redundant plots.
Sample clustering was omitted, having been deemed unnecessary.
Additional Features
Option to do tree cutting and/or subsqeuent merging by UCLA-WGCNA algorithm or by 'Sage classic' algorithm.
Separation of rote, time consuming steps (correlation, TOM computation) from tree cutting.
Separation of analysis from plotting.
Separation of analysis from file system, to facilitate Synpase integration.
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