Deployed Stacks

We now have the following CNAMEs for Synapse in the sagebase.org domain:

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• crowd-dev.sagebase.org – for the dev/test Crowd instance, the default for our code base (-> elastic IP 50.17.192.58)
• crowd.sagebase.org – for the production Crowd instance, specified in Synpase via a system property, as documented on Synapse Stack Deployment (-> elastic IP 50.17.212.74)

Current Beanstalk Resources LAST UPDATED: 20Jun2011

Synapse Deployment Instructions

Get the built artifacts from Artifactory

You should not be deploying anything you built yourself on your local machine.  Only deploy builds generated by Bamboo and stored in Artifactory.

Create Beanstalk Environments (Skip this section if using existing Environments.)

log in to AWS

http://aws.amazon.com/console/

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Create two more, so that there is one for Auth services, one for Repo services, and one for SynapseWeb

Create Host Name

Sign in to GoDaddy, select sagebase.org,  and launch Domain Manager. 

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Ditto for auth-prod and reposvc-prod

Create MySQL database

If necessary, create a new schema in the AWS RDS, e.g. using MySQL Workbench.

The schema name, for example, might be 'prodRepositoryDb'

Configure Environments

For the authentication service:

Click on 'edit configuration' in the Beanstalk UI.

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-DACCEPT_ALL_CERTS=true -Dorg.sagebionetworks.stack=staging -Dorg.sagebionetworks.stackEncryptionKey=integration-test-only-encryption-key

For the Repo service:

For 'HTTPS Listener port' choose '443'. 

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-DACCEPT_ALL_CERTS=true -Dorg.sagebionetworks.stack=staging -Dorg.sagebionetworks.stackEncryptionKey=integration-test-only-encryption-key

For the Synapse Web Application:

For 'HTTPS Listener port' choose '443'. 

For 'SSL Cert' choose arn:aws:iam::325565585839:server-certificate/SynapseCert

Set up Crowd

If necessary, the instructions are here:

http://sagebionetworks.jira.com/wiki/display/PLFM/Setting+Up+Production+Crowd

Restarting Crowd

If the server goes down:

To check if Crowd is up, in web browser go to
https://crowd.sagebase.org:8443/crowd
You should see Crowd log-in page.  If not then ssh in to crowd.sagebase.org  as ec2-user, using the standard key for 'platform' owned ec2 instances, PlatformKeyPairEast

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The above instructions apply to 'crowd-dev.sagebase.org' as well as 'crowd.sagebase.org'.

How to run the Data Loader

On one of the local servers, goto /work/platform/DatasetMetadataLoader and execute the following:

# Make sure you have the latest version
svn up
# Execute the loader
# Replace <repo_instance> and <auth_instance> by the repository and authentication instances.
# Either make sure that demouser@sagebase.org is a Synapse administrator on crowd, or replace it by a Synapse administrator account
python datasetCsvLoader.py -d ./AllDatasets.csv -l ./AllDatasetLayerLocations.csv -e http://<repo_instance>/repo/v1 -a http://<auth_instance>/auth/v1 -m /work/platform/DatasetMetadataLoader/platform.md5sums.csv -u demouser@sagebase.org -p demouser-pw

Verify Deployment

To verify deployment, run top-level queries against the repository instances from an authenticated account.

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