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  1. Use the AWS console to make a new S3 bucket named sagebio-YourUnixUsername Note: Do not put any underscores in your bucket name. Only use hyphens, lowercase letters and numbers.
  2. Make these five subdirectories
    1. scripts
    2. input
    3. output
    4. results
    5. logs

Set up your config file for the AWS Elastic MapReduce command line tool installed on the shared servers

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Get your AWS credentials

Get your security credentials from your AWS Account

  • Access Key ID
  • Secret Access Key

Set up the Elastic MapReduce command line

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tool

Set up your configuration files for the Elastic MapReduce AWS tool installed on the shared servers (belltown, sodo, ballard, ...)

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