Page Comparison

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1. ssh to sodo
2. Create the configuration file for s3curl command line tool

   Code Block
   ~>cat ~/.ssh/s3curl #!/bin/perl %awsSecretAccessKeys = ( YourUnixUsername => { id => 'YourAccessKeyID', key => 'YourSecretAccessKey', }, );

3. Make a symlink to it in your home directory

   Code Block
   ~>ln -s ~/.ssh/s3curl ~/.s3curl

4. Test that you can run s3curl

   Code Block
   ~> chmod 600 /home/$USER/.s3curl ~>/work/platform/bin/s3curl.pl --id $USER https://s3.amazonaws.com/sagebio-$USER/ | head -c 200 <?xml version="1.0" encoding="UTF-8"?> <ListBucketResult xmlns="http://s3.amazonaws.com/doc/2006-03-01/"><Name>sagebio-ndeflaux</Name><Prefix></Prefix><Marker></Marker><MaxKeys>1000</MaxKeys><IsTruncated>

...

~>ssh ndeflaux@pegasus.ccs.miami.edu
ndeflaux@pegasus.ccs.miami.edu's password: 
Last login: Thu May 19 18:59:51 2011 from dhcp149019.fhcrc.org


***********************************************************************
*                                                                     *
* Welcome to Pegasus Linux Cluster at CCS/University of Miami.        *
*                                                                     * 
* ....
*                                                                     *
***********************************************************************

[ndeflaux@u01 ~]$ nano file.txt
[ndeflaux@u01 ~]$ 

Where to go next?

• Try A Simple Example of an R MapReduce Job
• Take a look at the AWS documentation for Elastic MapReduce