Page Comparison

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Correlation between BCR batch and the processing batch for 27k arrays (January 20, 2012):

{csv}Batch on the download page,"# after ""HumanMethylation27k"" in the file name, Level 1",Batch as the sixth field in the patient barcode,Comments
Batch 34,3,0752,
Batch 37,"1, 2","0945, 1104","0945 comes from 1, one sample that is 1104 comes from 2"
Batch 52,2,1104,
Batch 58,4,1205,
Batch 84,no data,,
Batch 119,no data,,
Batch 144,no data,,
Batch 160,no data,,
Batch 166,no data,,
Batch 183,no data,,

{csv}

Correlation of batch with clinical traits

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Significant correlations of batch with the clinical variables:
Wiki Markup{csv}"LUAD_clinical_traits","DataType","NumberOfNAs","Test","Pvalue" "distant_metastasis_pathologic_spread","factor",115,"Pearson's Chi-squared test",5.22E-09 "days_to_form_completion","integer",124,"Kruskal-Wallis rank sum test",6.42E-04 "year_of_initial_pathologic_diagnosis","integer",108,"Kruskal-Wallis rank sum test",1.98E-03 "vital_status","factor",108,"Pearson's Chi-squared test",4.50E-03 {csv}

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