Page Comparison

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This page is intended to describe the workflow required to build, edit, and update the data model for MODEL-AD.

Data Modeling at Sage requires using two in-house tools: Schematic and the Data Curator App (DCA).

Schematic

Summary

Data Modeling at Sage requires using two in-house tools: Schematic and the Data Curator App (DCA). SCHEMATIC is an acronym for Schema Engine for Manifest Ingress and Curation. The Python based tool is a schema-based, metadata ingress ecosystem, intended to streamline of biomedical dataset annotation, metadata validation and submission to a data repository for various data contributors.

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https://sagebio.shinyapps.io/amp-ad-metadata-dictionary/

Data Curator App

https://dca-dev.app.sagebionetworks.org/

AD Portal DCA Test Project

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https://linkml.io/linkml/intro/tutorial.html

Glossary

Template

Manifest - metadata table submitted for dataset

https://learnxinyminutes.com/docs/yaml/

https://webprotege.stanford.edu/#projects/cb219a51-dd90-4921-bec4-c836bd96f680/edit/Properties?selection=ObjectProperty(%3Chttp://example.com/BallpointPenOntology/hasCharacteristic%3E)

Glossary

Template

Manifest - metadata table submitted for dataset