This guide helps organizers create a space within Synapse to host a crowd-sourced Challenge. Challenges are community competitions designed to crowd-source new computational methods for fundamental questions in systems biology and translational medicine. Learn more about Challenges and see examples of past and current projects by visiting Challenges and Benchmarking.
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When using copyWiki, it is important to specify the destinationSubPageId parameter. This ID can be found in the URL of the live site, where it is the integer following .../wiki/<some number>.
Once copyWiki has been used once, DO NOT USE IT AGAIN!!
Following this action, all changes to the live site should now be synced over with challengeutils' mirrow-wiki. More on updating the Wikis under the Update the Challenge section below.
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Column Name | Description | Facet values? |
|---|---|---|
| Evaluation ID (evaluation ID, but rendered as evaluation name) – recommended for SubmissionViews with multiple queues in scope |
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| Submission ID | |
| Date and time of the submission (in Epoch, but rendered as | |
| User or team who submitted (user or team ID, but rendered as username or team name) |
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| (Docker image name – recommended for model-to-data ) Docker image namechallenges |
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| (Docker SHA digest – recommended for model-to-data ) Docker SHA digestchallenges |
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| Workflow status of the submission (one of [ |
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| Evaluation status of the submission (one of [None, |
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| (if any) Validation errors for the predictions file |
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| Synapse ID to the submission’s logs folder |
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| Synapse ID to the predictions file (if any) |
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(any annotations related to scores) | Submission annotations - names used depends on what annotations were used in the scoring step of the workflow |
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