Available Data Templates
...
: https://www.synapse.org/#!Synapse:syn24167530
This table includes a list of data type we anticipate from each MODEL-AD site. The Assay
JAX | IU | PITT | UCI | ||
Assay | DMP | DMP | PTC | PTC | DMP |
Gene expression | |||||
Imaging | |||||
Pharmacokinetic - Template in Development | |||||
...
Program:
MODEL-ADGrant:
<GrantNumber>Study:
<Study>Transfer:
<StartDate>Metadata staging:
<MetadataPath>Data staging:
<DataPath>
Synapse Tutorials
If you haven’t arleahttps://help.synapse.org/docs/Getting-Started.2055471150.html
https://help.synapse.org/docs/Quick-Start:-Files-and-Folders.2058846522.html
https://help.synapse.org/docs/Get-Started-with-Downloading-Data.2004254837.html Upload data to
Synapse Client
https://help.synapse.org/docs/Installing-Synapse-API-Clients.1985249668.html
https://help.synapse.org/docs/Upload-and-Download-Data-in-Bulk.2003796248.html
...
Once your metadata and data files are ready to upload to Synapse, specify the parentID for each file type in the manifest file. Then you will be able to use a Synapse client (Python, R, or cli) to automatically transfer each file to its correct location on Synapse. The curator will review and annotate the data. If everything is OK, the files will be moved to their permanent location and made publicly available. Otherwise, we will email you with any questions.
...