When trying to create links to several hundred files on synapse, I find that I cannot create more than 57-58 at a time. I try to iterate over a vector of synIDs like so (these projects are private; let me know if you want me to set up a new Synapse project for testing):
This successfully creates 57 links (using staging-RAN versions of synapser/PythonEmbedInR) or 58 links (using RAN versions). After those links, the process seems to hang; I'm not returned to prompt in the console, but links cease to be created.
If I then manually interrupt the process and try to use other synapser functions, e.g. synGet(), synGetChildren() etc., I get the following error:
Right now my only workaround is to split up the vector of synIDs into chunks and create links for 50 at a time, manually restarting my R session in between each chunk. I have close to 700 files I'm trying to link, so it would be really great if there was another solution.