Python client and synapser cannot handle table column type LINK
Description
to reproduce my workflow:
import synapseclient
syn = synapseclient.login()
results = syn.tableQuery("select * from syn1234")
results.asRowSet()
if there is a column with type LINK, then you will get this error:
ValueError: Unknown column type: LINK
Not a major need... just noted.
_Nasim
Environment
Activity
And needs to be fixed here:
https://github.com/Sage-Bionetworks/synapsePythonClient/blob/master/synapseclient/table.py#L452
https://github.com/Sage-Bionetworks/synapsePythonClient/pull/510 can you review?
Please also modify the unit test test_cast_values() in unit_test_tables.py to include this case.
I added it. thanks!
It worked like a charm thanks!
use-case validated/tested by:
import synapseclient
syn = synapseclient.login()
results = syn.tableQuery('select * from syn10923842')
obj = results.asRowSet()
Assignee
Reporter
Labels
Validator
Development Area
Release Version History
Fix versions
Priority
