Upload error

Description

Not sure if this is same as previous errors but I am seeing a lot of:

Traceback (most recent call last):
File "./synapseLoad_files.py", line 98, in <module>
p.map(loadOneSample, glob(os.path.join( args.src, "*.json")))
File "/gluster/toolbox/python/2.7.5/lib/python2.7/multiprocessing/pool.py", line 250, in map
return self.map_async(func, iterable, chunksize).get()
File "/gluster/toolbox/python/2.7.5/lib/python2.7/multiprocessing/pool.py", line 554, in get
raise self._value
synapseclient.exceptions.SynapseError: java.lang.RuntimeException: Timed out waiting for S3 object to become visible: Key: 372127/9abf5911-741f-497b-9550-38a09fcd6cbf/unc.edu_THYM_IlluminaHiSeq_RNASeqV2.geneExp.tsv/3 storageLocationId: null token: org.sagebionetworks.repo.model.file.ChunkedFileToken [uploadId=6eBMBw.6_0wtQNj3Pptwbl9I8lhdzl8NDPtp7.jlVUpCjnarUmc65YnkQJDeujxuGEtHzU5CAEgcl3xkMCwaRr5v_fR6nxqhv.SwWL7e2hsBudJLDyII5TXwkkpBkgU7 contentMD5=5a2e04ba02384165a300f380fcd3ddfd fileName=unc.edu_THYM_IlluminaHiSeq_RNASeqV2.geneExp.tsv contentType=text/tab-separated-values key=372127/9abf5911-741f-497b-9550-38a09fcd6cbf/unc.edu_THYM_IlluminaHiSeq_RNASeqV2.geneExp.tsv storageLocationId=null ]

and separately 400 error thrown on uploads.

Environment

None

Activity

Show:
Mike Kellen
June 1, 2015, 7:22 PM

Assume fixed in 1.3, reopen if observed more

Fixed
Your pinned fields
Click on the next to a field label to start pinning.

Assignee

Chris Bare

Reporter

Larsson Omberg